Skip to content

Class: SubmissionDataFiles

URI: imgsg_dev:SubmissionDataFiles

classDiagram class SubmissionDataFiles click SubmissionDataFiles href "../SubmissionDataFiles/" SubmissionDataFiles : file_name SubmissionDataFiles : file_type SubmissionDataFiles : md5sum SubmissionDataFiles : submission_id SubmissionDataFiles --> "0..1" Submission : submission_id click Submission href "../Submission/"

Slots

Name Cardinality and Range Description Inheritance
submission_id 0..1
Submission		 Foreign key to submission direct
file_type 0..1
String		 direct
file_name 0..1
String		 direct
md5sum 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type Mapped Value
self imgsg_dev:SubmissionDataFiles
native imgsg_dev:SubmissionDataFiles

LinkML Source

Direct

name: submission_data_files
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    description: Foreign key to submission
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: submission
    required: false
  file_type:
    name: file_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - phajek_test
    - submission_data_files
    - submission_data_files_dmpath
    range: string
    required: false
  file_name:
    name: file_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - phajek_test
    - submission_data_files
    - submission_data_files_dmpath
    range: string
    required: false
  md5sum:
    name: md5sum
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_data_files
    range: string
    required: false

Induced

name: submission_data_files
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    description: Foreign key to submission
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: submission_id
    owner: submission_data_files
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: submission
    required: false
  file_type:
    name: file_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: file_type
    owner: submission_data_files
    domain_of:
    - phajek_test
    - submission_data_files
    - submission_data_files_dmpath
    range: string
    required: false
  file_name:
    name: file_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: file_name
    owner: submission_data_files
    domain_of:
    - phajek_test
    - submission_data_files
    - submission_data_files_dmpath
    range: string
    required: false
  md5sum:
    name: md5sum
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: md5sum
    owner: submission_data_files
    domain_of:
    - submission_data_files
    range: string
    required: false