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Class: SubmissionProcStats

URI: imgsg_dev:SubmissionProcStats

classDiagram class SubmissionProcStats click SubmissionProcStats href "../SubmissionProcStats/" SubmissionProcStats : avg_seq SubmissionProcStats : description SubmissionProcStats : longest_seq SubmissionProcStats : median_seq SubmissionProcStats : no_pred_features SubmissionProcStats : picture_file SubmissionProcStats : shortest_seq SubmissionProcStats : standard_dev SubmissionProcStats : step SubmissionProcStats : submission_id SubmissionProcStats : total_bases SubmissionProcStats : total_seq SubmissionProcStats : type_of_feature

Slots

Name Cardinality and Range Description Inheritance
submission_id 0..1
Integer		 direct
step 0..1
String		 direct
description 0..1
String		 direct
total_seq 0..1
Integer		 direct
total_bases 0..1
Integer		 direct
shortest_seq 0..1
Integer		 direct
longest_seq 0..1
Integer		 direct
avg_seq 0..1
Integer		 direct
median_seq 0..1
Integer		 direct
standard_dev 0..1
Integer		 direct
picture_file 0..1
String		 direct
type_of_feature 0..1
String		 direct
no_pred_features 0..1
Integer		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type Mapped Value
self imgsg_dev:SubmissionProcStats
native imgsg_dev:SubmissionProcStats

LinkML Source

Direct

name: submission_proc_stats
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: integer
    required: false
  step:
    name: step
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - annotation_step_stats
    - submission_proc_stats
    - submission_proc_steps
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - gold_sequencing_project
    - img_group_news
    - imgcv
    - not_to_release
    - ora_aspnet_applications
    - ora_aspnet_roles
    - ora_aspnet_sitemap
    - project_info_biosample
    - public_workspace
    - study_load
    - submission_proc_stats
    - web_page_codecv
    - webpagecv
    range: string
    required: false
  total_seq:
    name: total_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  total_bases:
    name: total_bases
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  shortest_seq:
    name: shortest_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  longest_seq:
    name: longest_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  avg_seq:
    name: avg_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  median_seq:
    name: median_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  standard_dev:
    name: standard_dev
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  picture_file:
    name: picture_file
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  type_of_feature:
    name: type_of_feature
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  no_pred_features:
    name: no_pred_features
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false

Induced

name: submission_proc_stats
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: submission_id
    owner: submission_proc_stats
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: integer
    required: false
  step:
    name: step
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: step
    owner: submission_proc_stats
    domain_of:
    - annotation_step_stats
    - submission_proc_stats
    - submission_proc_steps
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: description
    owner: submission_proc_stats
    domain_of:
    - gold_sequencing_project
    - img_group_news
    - imgcv
    - not_to_release
    - ora_aspnet_applications
    - ora_aspnet_roles
    - ora_aspnet_sitemap
    - project_info_biosample
    - public_workspace
    - study_load
    - submission_proc_stats
    - web_page_codecv
    - webpagecv
    range: string
    required: false
  total_seq:
    name: total_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: total_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  total_bases:
    name: total_bases
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: total_bases
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  shortest_seq:
    name: shortest_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: shortest_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  longest_seq:
    name: longest_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: longest_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  avg_seq:
    name: avg_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: avg_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  median_seq:
    name: median_seq
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: median_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  standard_dev:
    name: standard_dev
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: standard_dev
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  picture_file:
    name: picture_file
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: picture_file
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  type_of_feature:
    name: type_of_feature
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: type_of_feature
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  no_pred_features:
    name: no_pred_features
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: no_pred_features
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false