Skip to content

Class: SubmissionSamples

URI: imgsg_dev:SubmissionSamples

classDiagram class SubmissionSamples click SubmissionSamples href "../SubmissionSamples/" SubmissionSamples : sample_oid SubmissionSamples : submission_id

Slots

Name Cardinality and Range Description Inheritance
submission_id 0..1
Integer		 direct
sample_oid 0..1
Integer		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type Mapped Value
self imgsg_dev:SubmissionSamples
native imgsg_dev:SubmissionSamples

LinkML Source

Direct

name: submission_samples
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: integer
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - contact_sample_perms
    - env_sample
    - env_sample_data_links
    - env_sample_diseases
    - env_sample_energy_source
    - env_sample_habitat_type
    - env_sample_jgi_url
    - env_sample_metabolism
    - env_sample_misc_meta_data
    - env_sample_phenotypes
    - env_sample_seq_method
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - submission
    - submission_samples
    - vsample
    range: integer
    required: false

Induced

name: submission_samples
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: submission_id
    owner: submission_samples
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: integer
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_oid
    owner: submission_samples
    domain_of:
    - contact_sample_perms
    - env_sample
    - env_sample_data_links
    - env_sample_diseases
    - env_sample_energy_source
    - env_sample_habitat_type
    - env_sample_jgi_url
    - env_sample_metabolism
    - env_sample_misc_meta_data
    - env_sample_phenotypes
    - env_sample_seq_method
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - submission
    - submission_samples
    - vsample
    range: integer
    required: false