Class: Vsample

URI: imgsg_dev:Vsample

classDiagram class Vsample click Vsample href "../Vsample/" Vsample : add_date Vsample : altitude Vsample : assembly_method Vsample : binning_method Vsample : body_product Vsample : body_site Vsample : body_subsite Vsample : chromosome_count Vsample : comments Vsample : contact Vsample : contig_count Vsample : date_collected Vsample : depth Vsample : ecosystem Vsample : ecosystem_category Vsample : ecosystem_subtype Vsample : ecosystem_type Vsample : est_biomass Vsample : est_diversity Vsample : est_size Vsample : gc_perc Vsample : gene_calling_method Vsample : gene_count Vsample : geo_location Vsample : gold_id Vsample : gold_stamp_id Vsample : host_age Vsample : host_comments Vsample : host_gender Vsample : host_health_condition Vsample : host_medication Vsample : host_name Vsample : host_ncbi_taxid Vsample : host_race Vsample : host_spec Vsample : host_taxon_id Vsample : image_url Vsample : img_oid Vsample : iso_comments Vsample : iso_country Vsample : iso_pubmed_id Vsample : iso_source Vsample : latitude Vsample : library_method Vsample : longitude Vsample : mod_date Vsample : modified_by Vsample : mrn Vsample : ncbi_archive_id Vsample : ncbi_project_id Vsample : ncbi_project_name Vsample : oxygen_req Vsample : ph Vsample : plasmid_count Vsample : pressure Vsample : project_info Vsample : pub_journal Vsample : pub_link Vsample : pub_vol Vsample : reads_count Vsample : replicate_num Vsample : salinity Vsample : sample_description Vsample : sample_display_name Vsample : sample_isolation Vsample : sample_link Vsample : sample_oid Vsample : sample_site Vsample : sample_volume Vsample : sampling_strategy Vsample : seq_center_name Vsample : seq_center_pid Vsample : seq_center_url Vsample : seq_comments Vsample : seq_country Vsample : seq_depth Vsample : seq_quality Vsample : seq_status Vsample : seq_status_link Vsample : show_in_dacc Vsample : singlet_count Vsample : specific_ecosystem Vsample : sra_id Vsample : temp Vsample : temp_range Vsample : units Vsample : vector Vsample : visit_num

Slots

Name	Cardinality and Range	Inheritance
sample_oid	0..1 Integer	direct
gold_id	0..1 String	direct
gold_stamp_id	0..1 String	direct
sample_display_name	0..1 String	direct
sample_site	0..1 String	direct
date_collected	0..1 String	direct
geo_location	0..1 String	direct
latitude	0..1 String	direct
longitude	0..1 String	direct
altitude	0..1 String	direct
sampling_strategy	0..1 String	direct
sample_isolation	0..1 String	direct
sample_volume	0..1 String	direct
est_biomass	0..1 String	direct
est_diversity	0..1 String	direct
oxygen_req	0..1 String	direct
temp	0..1 String	direct
salinity	0..1 String	direct
pressure	0..1 String	direct
ph	0..1 String	direct
host_ncbi_taxid	0..1 Integer	direct
host_name	0..1 String	direct
host_gender	0..1 String	direct
host_age	0..1 String	direct
host_health_condition	0..1 String	direct
library_method	0..1 String	direct
est_size	0..1 Integer	direct
binning_method	0..1 String	direct
contig_count	0..1 Integer	direct
singlet_count	0..1 Integer	direct
units	0..1 String	direct
gene_count	0..1 Integer	direct
comments	0..1 String	direct
add_date	0..1 Datetime	direct
mod_date	0..1 Datetime	direct
modified_by	0..1 Integer	direct
contact	0..1 Integer	direct
project_info	0..1 Integer	direct
temp_range	0..1 String	direct
sample_link	0..1 String	direct
assembly_method	0..1 String	direct
seq_depth	0..1 String	direct
gene_calling_method	0..1 String	direct
gc_perc	0..1 Float	direct
chromosome_count	0..1 Integer	direct
plasmid_count	0..1 Integer	direct
ncbi_project_id	0..1 Integer	direct
img_oid	0..1 Integer	direct
iso_country	0..1 String	direct
pub_journal	0..1 String	direct
pub_vol	0..1 String	direct
pub_link	0..1 String	direct
ncbi_archive_id	0..1 Integer	direct
depth	0..1 String	direct
iso_comments	0..1 String	direct
iso_source	0..1 String	direct
ecosystem	0..1 String	direct
ecosystem_category	0..1 String	direct
ecosystem_type	0..1 String	direct
ecosystem_subtype	0..1 String	direct
specific_ecosystem	0..1 String	direct
sample_description	0..1 String	direct
seq_status	0..1 String	direct
seq_status_link	0..1 String	direct
reads_count	0..1 String	direct
vector	0..1 String	direct
seq_country	0..1 String	direct
seq_quality	0..1 String	direct
host_spec	0..1 Integer	direct
host_race	0..1 String	direct
host_comments	0..1 String	direct
host_medication	0..1 String	direct
host_taxon_id	0..1 Integer	direct
iso_pubmed_id	0..1 Integer	direct
seq_comments	0..1 String	direct
sra_id	0..1 String	direct
ncbi_project_name	0..1 String	direct
seq_center_pid	0..1 Integer	direct
mrn	0..1 Integer	direct
body_site	0..1 String	direct
body_subsite	0..1 String	direct
body_product	0..1 String	direct
seq_center_name	0..1 String	direct
seq_center_url	0..1 String	direct
image_url	0..1 String	direct
show_in_dacc	0..1 String	direct
visit_num	0..1 Integer	direct
replicate_num	0..1 Integer	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type	Mapped Value
self	imgsg_dev:Vsample
native	imgsg_dev:Vsample

LinkML Source

Direct

name: vsample
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - contact_sample_perms
    - env_sample
    - env_sample_data_links
    - env_sample_diseases
    - env_sample_energy_source
    - env_sample_habitat_type
    - env_sample_jgi_url
    - env_sample_metabolism
    - env_sample_misc_meta_data
    - env_sample_phenotypes
    - env_sample_seq_method
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - submission
    - submission_samples
    - vsample
    range: integer
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  gold_stamp_id:
    name: gold_stamp_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  sample_display_name:
    name: sample_display_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sample_site:
    name: sample_site
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  date_collected:
    name: date_collected
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: string
    required: false
  geo_location:
    name: geo_location
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  latitude:
    name: latitude
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - countrycv
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  longitude:
    name: longitude
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - countrycv
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  altitude:
    name: altitude
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  sampling_strategy:
    name: sampling_strategy
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sample_isolation:
    name: sample_isolation
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sample_volume:
    name: sample_volume
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  est_biomass:
    name: est_biomass
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  est_diversity:
    name: est_diversity
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  oxygen_req:
    name: oxygen_req
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  temp:
    name: temp
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  salinity:
    name: salinity
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pressure:
    name: pressure
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  ph:
    name: ph
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_ncbi_taxid:
    name: host_ncbi_taxid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false
  host_name:
    name: host_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_gender:
    name: host_gender
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_age:
    name: host_age
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_health_condition:
    name: host_health_condition
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  library_method:
    name: library_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  est_size:
    name: est_size
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  binning_method:
    name: binning_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_analysis_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  contig_count:
    name: contig_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_analysis_project
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - v5_ap_imperfect_view
    - vsample
    range: integer
    required: false
  singlet_count:
    name: singlet_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  units:
    name: units
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  gene_count:
    name: gene_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_analysis_project
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - assembly
    - cancelled_user
    - contact
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - img_group
    - ora_aspnet_membership
    - project_info
    - project_info_04112013
    - project_info_genbank_authors
    - project_info_nitrogen_fixation
    - request_account
    - submission
    - submission_history
    - submission_proc_steps
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - contact
    - env_sample
    - gold_sequencing_project
    - img_group
    - img_group_news
    - not_to_release
    - perferred_mbin_queue
    - project_info
    - project_info_04112013
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - vsample
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - announcement
    - cancelled_user
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - img_group_news
    - lanl_project
    - ornl_project
    - project_info
    - project_info_04112013
    - project_info_natural_prods
    - request_account
    - study_load
    - submission
    - submission_history
    - vsample
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - announcement
    - cancelled_user
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - project_info_natural_prods
    - request_account
    - submission
    - submission_history
    - vsample
    range: integer
    required: false
  contact:
    name: contact
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - submission
    - vsample
    range: integer
    required: false
  project_info:
    name: project_info
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - submission
    - vsample
    range: integer
    required: false
  temp_range:
    name: temp_range
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  sample_link:
    name: sample_link
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  assembly_method:
    name: assembly_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_analysis_project
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - vsample
    range: string
    required: false
  seq_depth:
    name: seq_depth
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  gene_calling_method:
    name: gene_calling_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_analysis_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  gc_perc:
    name: gc_perc
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: float
    required: false
  chromosome_count:
    name: chromosome_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - vsample
    range: integer
    required: false
  plasmid_count:
    name: plasmid_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - vsample
    range: integer
    required: false
  ncbi_project_id:
    name: ncbi_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - study_load
    - vsample
    range: integer
    required: false
  img_oid:
    name: img_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_img_nat_prod_entity
    - project_info
    - project_info_04112013
    - project_info_natural_prods
    - project_info_nprods_metadata
    - vsample
    range: integer
    required: false
  iso_country:
    name: iso_country
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pub_journal:
    name: pub_journal
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pub_vol:
    name: pub_vol
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pub_link:
    name: pub_link
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  ncbi_archive_id:
    name: ncbi_archive_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  depth:
    name: depth
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - plan_table
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  iso_comments:
    name: iso_comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  iso_source:
    name: iso_source
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem_category
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem_type
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem_subtype
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvspecific_ecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  sample_description:
    name: sample_description
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  seq_status:
    name: seq_status
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - submission
    - vsample
    range: string
    required: false
  seq_status_link:
    name: seq_status_link
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  reads_count:
    name: reads_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  vector:
    name: vector
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  seq_country:
    name: seq_country
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  seq_quality:
    name: seq_quality
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_spec:
    name: host_spec
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  host_race:
    name: host_race
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_comments:
    name: host_comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_medication:
    name: host_medication
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_taxon_id:
    name: host_taxon_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  iso_pubmed_id:
    name: iso_pubmed_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  seq_comments:
    name: seq_comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sra_id:
    name: sra_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - biosample
    - env_sample
    - gold_sp_sra
    - vsample
    range: string
    required: false
  ncbi_project_name:
    name: ncbi_project_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - vsample
    range: string
    required: false
  seq_center_pid:
    name: seq_center_pid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: integer
    required: false
  mrn:
    name: mrn
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false
  body_site:
    name: body_site
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  body_subsite:
    name: body_subsite
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  body_product:
    name: body_product
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - project_info_body_products
    - vsample
    range: string
    required: false
  seq_center_name:
    name: seq_center_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  seq_center_url:
    name: seq_center_url
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  image_url:
    name: image_url
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  show_in_dacc:
    name: show_in_dacc
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  visit_num:
    name: visit_num
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false
  replicate_num:
    name: replicate_num
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false

Induced

name: vsample
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_oid
    owner: vsample
    domain_of:
    - contact_sample_perms
    - env_sample
    - env_sample_data_links
    - env_sample_diseases
    - env_sample_energy_source
    - env_sample_habitat_type
    - env_sample_jgi_url
    - env_sample_metabolism
    - env_sample_misc_meta_data
    - env_sample_phenotypes
    - env_sample_seq_method
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - submission
    - submission_samples
    - vsample
    range: integer
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gold_id
    owner: vsample
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  gold_stamp_id:
    name: gold_stamp_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gold_stamp_id
    owner: vsample
    domain_of:
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  sample_display_name:
    name: sample_display_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_display_name
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sample_site:
    name: sample_site
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_site
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  date_collected:
    name: date_collected
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: date_collected
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: string
    required: false
  geo_location:
    name: geo_location
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: geo_location
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  latitude:
    name: latitude
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: latitude
    owner: vsample
    domain_of:
    - countrycv
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  longitude:
    name: longitude
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: longitude
    owner: vsample
    domain_of:
    - countrycv
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  altitude:
    name: altitude
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: altitude
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  sampling_strategy:
    name: sampling_strategy
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sampling_strategy
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sample_isolation:
    name: sample_isolation
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_isolation
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sample_volume:
    name: sample_volume
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_volume
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  est_biomass:
    name: est_biomass
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: est_biomass
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  est_diversity:
    name: est_diversity
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: est_diversity
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  oxygen_req:
    name: oxygen_req
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: oxygen_req
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  temp:
    name: temp
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: temp
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  salinity:
    name: salinity
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: salinity
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pressure:
    name: pressure
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: pressure
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  ph:
    name: ph
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ph
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_ncbi_taxid:
    name: host_ncbi_taxid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_ncbi_taxid
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false
  host_name:
    name: host_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_name
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_gender:
    name: host_gender
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_gender
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_age:
    name: host_age
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_age
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_health_condition:
    name: host_health_condition
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_health_condition
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  library_method:
    name: library_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: library_method
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  est_size:
    name: est_size
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: est_size
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  binning_method:
    name: binning_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: binning_method
    owner: vsample
    domain_of:
    - env_sample
    - gold_analysis_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  contig_count:
    name: contig_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: contig_count
    owner: vsample
    domain_of:
    - env_sample
    - gold_analysis_project
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - v5_ap_imperfect_view
    - vsample
    range: integer
    required: false
  singlet_count:
    name: singlet_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: singlet_count
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  units:
    name: units
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: units
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  gene_count:
    name: gene_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gene_count
    owner: vsample
    domain_of:
    - env_sample
    - gold_analysis_project
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: comments
    owner: vsample
    domain_of:
    - assembly
    - cancelled_user
    - contact
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - img_group
    - ora_aspnet_membership
    - project_info
    - project_info_04112013
    - project_info_genbank_authors
    - project_info_nitrogen_fixation
    - request_account
    - submission
    - submission_history
    - submission_proc_steps
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: add_date
    owner: vsample
    domain_of:
    - contact
    - env_sample
    - gold_sequencing_project
    - img_group
    - img_group_news
    - not_to_release
    - perferred_mbin_queue
    - project_info
    - project_info_04112013
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - vsample
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: mod_date
    owner: vsample
    domain_of:
    - announcement
    - cancelled_user
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - img_group_news
    - lanl_project
    - ornl_project
    - project_info
    - project_info_04112013
    - project_info_natural_prods
    - request_account
    - study_load
    - submission
    - submission_history
    - vsample
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: modified_by
    owner: vsample
    domain_of:
    - announcement
    - cancelled_user
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - project_info_natural_prods
    - request_account
    - submission
    - submission_history
    - vsample
    range: integer
    required: false
  contact:
    name: contact
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: contact
    owner: vsample
    domain_of:
    - env_sample
    - submission
    - vsample
    range: integer
    required: false
  project_info:
    name: project_info
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: project_info
    owner: vsample
    domain_of:
    - env_sample
    - submission
    - vsample
    range: integer
    required: false
  temp_range:
    name: temp_range
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: temp_range
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  sample_link:
    name: sample_link
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_link
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  assembly_method:
    name: assembly_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: assembly_method
    owner: vsample
    domain_of:
    - env_sample
    - gold_analysis_project
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - vsample
    range: string
    required: false
  seq_depth:
    name: seq_depth
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_depth
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  gene_calling_method:
    name: gene_calling_method
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gene_calling_method
    owner: vsample
    domain_of:
    - env_sample
    - gold_analysis_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  gc_perc:
    name: gc_perc
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gc_perc
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: float
    required: false
  chromosome_count:
    name: chromosome_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: chromosome_count
    owner: vsample
    domain_of:
    - env_sample
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - vsample
    range: integer
    required: false
  plasmid_count:
    name: plasmid_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: plasmid_count
    owner: vsample
    domain_of:
    - env_sample
    - pig_tracks
    - project_info
    - project_info_04112013
    - project_info_genbank
    - vsample
    range: integer
    required: false
  ncbi_project_id:
    name: ncbi_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ncbi_project_id
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - study_load
    - vsample
    range: integer
    required: false
  img_oid:
    name: img_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: img_oid
    owner: vsample
    domain_of:
    - env_sample
    - gold_img_nat_prod_entity
    - project_info
    - project_info_04112013
    - project_info_natural_prods
    - project_info_nprods_metadata
    - vsample
    range: integer
    required: false
  iso_country:
    name: iso_country
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: iso_country
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pub_journal:
    name: pub_journal
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: pub_journal
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pub_vol:
    name: pub_vol
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: pub_vol
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  pub_link:
    name: pub_link
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: pub_link
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  ncbi_archive_id:
    name: ncbi_archive_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ncbi_archive_id
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  depth:
    name: depth
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: depth
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - plan_table
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  iso_comments:
    name: iso_comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: iso_comments
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  iso_source:
    name: iso_source
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: iso_source
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem
    owner: vsample
    domain_of:
    - cvecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem_category
    owner: vsample
    domain_of:
    - cvecosystem_category
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem_type
    owner: vsample
    domain_of:
    - cvecosystem_type
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem_subtype
    owner: vsample
    domain_of:
    - cvecosystem_subtype
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: specific_ecosystem
    owner: vsample
    domain_of:
    - cvspecific_ecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  sample_description:
    name: sample_description
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sample_description
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  seq_status:
    name: seq_status
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_status
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - submission
    - vsample
    range: string
    required: false
  seq_status_link:
    name: seq_status_link
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_status_link
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  reads_count:
    name: reads_count
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: reads_count
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  vector:
    name: vector
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: vector
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  seq_country:
    name: seq_country
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_country
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  seq_quality:
    name: seq_quality
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_quality
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_spec:
    name: host_spec
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_spec
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  host_race:
    name: host_race
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_race
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_comments:
    name: host_comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_comments
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_medication:
    name: host_medication
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_medication
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  host_taxon_id:
    name: host_taxon_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: host_taxon_id
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  iso_pubmed_id:
    name: iso_pubmed_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: iso_pubmed_id
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: integer
    required: false
  seq_comments:
    name: seq_comments
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_comments
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  sra_id:
    name: sra_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: sra_id
    owner: vsample
    domain_of:
    - biosample
    - env_sample
    - gold_sp_sra
    - vsample
    range: string
    required: false
  ncbi_project_name:
    name: ncbi_project_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ncbi_project_name
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_biosample
    - vsample
    range: string
    required: false
  seq_center_pid:
    name: seq_center_pid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_center_pid
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: integer
    required: false
  mrn:
    name: mrn
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: mrn
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false
  body_site:
    name: body_site
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: body_site
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  body_subsite:
    name: body_subsite
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: body_subsite
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  body_product:
    name: body_product
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: body_product
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - project_info_body_products
    - vsample
    range: string
    required: false
  seq_center_name:
    name: seq_center_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_center_name
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  seq_center_url:
    name: seq_center_url
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: seq_center_url
    owner: vsample
    domain_of:
    - env_sample
    - vsample
    range: string
    required: false
  image_url:
    name: image_url
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: image_url
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  show_in_dacc:
    name: show_in_dacc
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: show_in_dacc
    owner: vsample
    domain_of:
    - env_sample
    - project_info
    - project_info_04112013
    - vsample
    range: string
    required: false
  visit_num:
    name: visit_num
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: visit_num
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false
  replicate_num:
    name: replicate_num
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: replicate_num
    owner: vsample
    domain_of:
    - env_sample
    - gold_sequencing_project
    - vsample
    range: integer
    required: false