Class: BlatESTClusterHit

Individual EST hit within a cluster.

URI: https://w3id.org/jgi/mycocosm/BlatESTClusterHit

classDiagram class BlatESTClusterHit click BlatESTClusterHit href "../BlatESTClusterHit/" BlatESTClusterHit : cluster_id BlatESTClusterHit : est_id BlatESTClusterHit : id

Slots

Name	Cardinality and Range	Inheritance
id	1 Integer	direct
cluster_id	0..1 Integer	direct
est_id	0..1 String	direct

Identifier and Mapping Information

Annotations

property	value
source_table	BlatESTclustersHit

Schema Source

from schema: https://w3id.org/jgi/mycocosm

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/jgi/mycocosm/BlatESTClusterHit
native	https://w3id.org/jgi/mycocosm/BlatESTClusterHit

LinkML Source

Direct

name: BlatESTClusterHit
annotations:
  source_table:
    tag: source_table
    value: BlatESTclustersHit
description: Individual EST hit within a cluster.
from_schema: https://w3id.org/jgi/mycocosm
attributes:
  id:
    name: id
    from_schema: https://w3id.org/jgi/mycocosm
    identifier: true
    domain_of:
    - FilteredModels
    - FilteredModelsBase
    - GeneCatalog
    - GenemarkPrediction
    - GenewisePrediction
    - BlastpHit
    - AllModels
    - BlatESTCluster
    - BlatESTClusterHit
    - SMCluster
    - SMClass
    - SMClusterMember
    - RepeatMaskerHit
    - RepeatMaskerSimple
    - TransposableElement
    - CEGMACompleteness
    - CEGMACompletenessDetail
    - ChromInfo
    - AnnotationState
    - AnnotationPriority
    - UserModel
    - PMAnnotationGroup
    - PMAnnotationStatus
    - PMAnnotator
    range: integer
    required: true
  cluster_id:
    name: cluster_id
    comments:
    - Foreign key to BlatESTCluster.id
    from_schema: https://w3id.org/jgi/mycocosm
    domain_of:
    - BlatESTCluster
    - BlatESTClusterHit
    - SMClusterMember
    range: integer
  est_id:
    name: est_id
    from_schema: https://w3id.org/jgi/mycocosm
    rank: 1000
    domain_of:
    - BlatESTClusterHit
    range: string

Induced

name: BlatESTClusterHit
annotations:
  source_table:
    tag: source_table
    value: BlatESTclustersHit
description: Individual EST hit within a cluster.
from_schema: https://w3id.org/jgi/mycocosm
attributes:
  id:
    name: id
    from_schema: https://w3id.org/jgi/mycocosm
    identifier: true
    alias: id
    owner: BlatESTClusterHit
    domain_of:
    - FilteredModels
    - FilteredModelsBase
    - GeneCatalog
    - GenemarkPrediction
    - GenewisePrediction
    - BlastpHit
    - AllModels
    - BlatESTCluster
    - BlatESTClusterHit
    - SMCluster
    - SMClass
    - SMClusterMember
    - RepeatMaskerHit
    - RepeatMaskerSimple
    - TransposableElement
    - CEGMACompleteness
    - CEGMACompletenessDetail
    - ChromInfo
    - AnnotationState
    - AnnotationPriority
    - UserModel
    - PMAnnotationGroup
    - PMAnnotationStatus
    - PMAnnotator
    range: integer
    required: true
  cluster_id:
    name: cluster_id
    comments:
    - Foreign key to BlatESTCluster.id
    from_schema: https://w3id.org/jgi/mycocosm
    alias: cluster_id
    owner: BlatESTClusterHit
    domain_of:
    - BlatESTCluster
    - BlatESTClusterHit
    - SMClusterMember
    range: integer
  est_id:
    name: est_id
    from_schema: https://w3id.org/jgi/mycocosm
    rank: 1000
    alias: est_id
    owner: BlatESTClusterHit
    domain_of:
    - BlatESTClusterHit
    range: string