Class: FilteredModelsBase

Base information for filtered models.

URI: https://w3id.org/jgi/mycocosm/FilteredModelsBase

classDiagram class FilteredModelsBase click FilteredModelsBase href "../FilteredModelsBase/" FilteredModelsBase : id FilteredModelsBase : protein_id FilteredModelsBase : transcript_id

Slots

Name	Cardinality and Range	Inheritance
id	1 Integer	direct
protein_id	0..1 String	direct
transcript_id	0..1 String	direct

Identifier and Mapping Information

Annotations

property	value
source_table	FilteredModels1Base

Schema Source

from schema: https://w3id.org/jgi/mycocosm

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/jgi/mycocosm/FilteredModelsBase
native	https://w3id.org/jgi/mycocosm/FilteredModelsBase

LinkML Source

Direct

name: FilteredModelsBase
annotations:
  source_table:
    tag: source_table
    value: FilteredModels1Base
description: Base information for filtered models.
from_schema: https://w3id.org/jgi/mycocosm
attributes:
  id:
    name: id
    from_schema: https://w3id.org/jgi/mycocosm
    identifier: true
    domain_of:
    - FilteredModels
    - FilteredModelsBase
    - GeneCatalog
    - GenemarkPrediction
    - GenewisePrediction
    - BlastpHit
    - AllModels
    - BlatESTCluster
    - BlatESTClusterHit
    - SMCluster
    - SMClass
    - SMClusterMember
    - RepeatMaskerHit
    - RepeatMaskerSimple
    - TransposableElement
    - CEGMACompleteness
    - CEGMACompletenessDetail
    - ChromInfo
    - AnnotationState
    - AnnotationPriority
    - UserModel
    - PMAnnotationGroup
    - PMAnnotationStatus
    - PMAnnotator
    range: integer
    required: true
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/jgi/mycocosm
    rank: 1000
    domain_of:
    - FilteredModelsBase
    range: string
  transcript_id:
    name: transcript_id
    from_schema: https://w3id.org/jgi/mycocosm
    rank: 1000
    domain_of:
    - FilteredModelsBase
    range: string

Induced

name: FilteredModelsBase
annotations:
  source_table:
    tag: source_table
    value: FilteredModels1Base
description: Base information for filtered models.
from_schema: https://w3id.org/jgi/mycocosm
attributes:
  id:
    name: id
    from_schema: https://w3id.org/jgi/mycocosm
    identifier: true
    alias: id
    owner: FilteredModelsBase
    domain_of:
    - FilteredModels
    - FilteredModelsBase
    - GeneCatalog
    - GenemarkPrediction
    - GenewisePrediction
    - BlastpHit
    - AllModels
    - BlatESTCluster
    - BlatESTClusterHit
    - SMCluster
    - SMClass
    - SMClusterMember
    - RepeatMaskerHit
    - RepeatMaskerSimple
    - TransposableElement
    - CEGMACompleteness
    - CEGMACompletenessDetail
    - ChromInfo
    - AnnotationState
    - AnnotationPriority
    - UserModel
    - PMAnnotationGroup
    - PMAnnotationStatus
    - PMAnnotator
    range: integer
    required: true
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/jgi/mycocosm
    rank: 1000
    alias: protein_id
    owner: FilteredModelsBase
    domain_of:
    - FilteredModelsBase
    range: string
  transcript_id:
    name: transcript_id
    from_schema: https://w3id.org/jgi/mycocosm
    rank: 1000
    alias: transcript_id
    owner: FilteredModelsBase
    domain_of:
    - FilteredModelsBase
    range: string