Slot: id

URI: https://w3id.org/jgi/mycocosm/id Alias: id

Applicable Classes

Name	Description	Modifies Slot
BlastpHit	BLASTP similarity search hit	no
ChromInfo	Chromosome/scaffold information	no
RepeatMaskerSimple	Simple repeat from RepeatMasker	no
FilteredModelsBase	Base information for filtered models	no
SMClusterMember	Gene member of an SM cluster	no
SMCluster	Secondary metabolite biosynthetic cluster	no
SMClass	Secondary metabolite class	no
CEGMACompleteness	CEGMA genome completeness assessment	no
PMAnnotationStatus	Annotation status in portal	no
GenemarkPrediction	GeneMark ab initio gene prediction	no
AnnotationPriority	Annotation priority settings	no
RepeatMaskerHit	RepeatMasker repeat element hit	no
PMAnnotator	Annotator information	no
GeneCatalog	Complete gene catalog for the genome	no
AllModels	All gene models (filtered + unfiltered)	no
BlatESTCluster	EST cluster from BLAT alignments	no
UserModel	User-submitted gene model (JAM system)	no
PMAnnotationGroup	Portal management annotation group	no
CEGMACompletenessDetail	Detailed CEGMA results per conserved gene	no
GenewisePrediction	GeneWise homology-based gene prediction	no
BlatESTClusterHit	Individual EST hit within a cluster	no
AnnotationState	Current annotation state/version	no
TransposableElement	Transposable element annotation	no
FilteredModels	Curated/filtered gene models - the primary gene set	no

Properties

• Range: String

Identifier and Mapping Information

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/jgi/mycocosm/id
native	https://w3id.org/jgi/mycocosm/id

LinkML Source

name: id
alias: id
domain_of:
- FilteredModels
- FilteredModelsBase
- GeneCatalog
- GenemarkPrediction
- GenewisePrediction
- BlastpHit
- AllModels
- BlatESTCluster
- BlatESTClusterHit
- SMCluster
- SMClass
- SMClusterMember
- RepeatMaskerHit
- RepeatMaskerSimple
- TransposableElement
- CEGMACompleteness
- CEGMACompletenessDetail
- ChromInfo
- AnnotationState
- AnnotationPriority
- UserModel
- PMAnnotationGroup
- PMAnnotationStatus
- PMAnnotator
range: string