Slot: scaffold

URI: https://w3id.org/jgi/mycocosm/scaffold Alias: scaffold

Applicable Classes

Name	Description	Modifies Slot
RepeatMaskerHit	RepeatMasker repeat element hit	no
RepeatMaskerSimple	Simple repeat from RepeatMasker	no
GenewisePrediction	GeneWise homology-based gene prediction	no
BlatESTCluster	EST cluster from BLAT alignments	no
UserModel	User-submitted gene model (JAM system)	no
GenemarkPrediction	GeneMark ab initio gene prediction	no
SMCluster	Secondary metabolite biosynthetic cluster	no
TransposableElement	Transposable element annotation	no
FilteredModels	Curated/filtered gene models - the primary gene set	no

Properties

• Range: String

Identifier and Mapping Information

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/jgi/mycocosm/scaffold
native	https://w3id.org/jgi/mycocosm/scaffold

LinkML Source

name: scaffold
alias: scaffold
domain_of:
- FilteredModels
- GenemarkPrediction
- GenewisePrediction
- BlatESTCluster
- SMCluster
- RepeatMaskerHit
- RepeatMaskerSimple
- TransposableElement
- UserModel
range: string