Class: Assay

Expression assay experiment.

URI: https://w3id.org/jgi/phytozome/Assay

classDiagram class Assay click Assay href "../Assay/" Assay : arraydesign_id Assay : assay_id Assay : assaydate Assay : description Assay : name Assay : protocol_id

Slots

Name	Cardinality and Range	Inheritance
assay_id	1 Integer	direct
arraydesign_id	0..1 Integer	direct
protocol_id	0..1 Integer	direct
assaydate	0..1 Datetime	direct
name	0..1 String	direct
description	0..1 String	direct

Identifier and Mapping Information

Annotations

property	value
source_table	assay

Schema Source

from schema: https://w3id.org/jgi/phytozome

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/jgi/phytozome/Assay
native	https://w3id.org/jgi/phytozome/Assay

LinkML Source

Direct

name: Assay
annotations:
  source_table:
    tag: source_table
    value: assay
description: Expression assay experiment.
from_schema: https://w3id.org/jgi/phytozome
attributes:
  assay_id:
    name: assay_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    identifier: true
    domain_of:
    - Assay
    - AssayBiomaterial
    - Acquisition
    range: integer
    required: true
  arraydesign_id:
    name: arraydesign_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    domain_of:
    - Assay
    - ArrayDesign
    range: integer
  protocol_id:
    name: protocol_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    domain_of:
    - Assay
    - Acquisition
    range: integer
  assaydate:
    name: assaydate
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    domain_of:
    - Assay
    range: datetime
  name:
    name: name
    from_schema: https://w3id.org/jgi/phytozome
    domain_of:
    - Feature
    - Analysis
    - CV
    - CVTerm
    - Biomaterial
    - CellLine
    - Assay
    - ArrayDesign
    - Acquisition
    - AnalysisSet
    - AnalysisGrp
    - Contact
    range: string
  description:
    name: description
    from_schema: https://w3id.org/jgi/phytozome
    domain_of:
    - Analysis
    - Biomaterial
    - Assay
    - AnalysisSet
    - Contact
    range: string

Induced

name: Assay
annotations:
  source_table:
    tag: source_table
    value: assay
description: Expression assay experiment.
from_schema: https://w3id.org/jgi/phytozome
attributes:
  assay_id:
    name: assay_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    identifier: true
    alias: assay_id
    owner: Assay
    domain_of:
    - Assay
    - AssayBiomaterial
    - Acquisition
    range: integer
    required: true
  arraydesign_id:
    name: arraydesign_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    alias: arraydesign_id
    owner: Assay
    domain_of:
    - Assay
    - ArrayDesign
    range: integer
  protocol_id:
    name: protocol_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    alias: protocol_id
    owner: Assay
    domain_of:
    - Assay
    - Acquisition
    range: integer
  assaydate:
    name: assaydate
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    alias: assaydate
    owner: Assay
    domain_of:
    - Assay
    range: datetime
  name:
    name: name
    from_schema: https://w3id.org/jgi/phytozome
    alias: name
    owner: Assay
    domain_of:
    - Feature
    - Analysis
    - CV
    - CVTerm
    - Biomaterial
    - CellLine
    - Assay
    - ArrayDesign
    - Acquisition
    - AnalysisSet
    - AnalysisGrp
    - Contact
    range: string
  description:
    name: description
    from_schema: https://w3id.org/jgi/phytozome
    alias: description
    owner: Assay
    domain_of:
    - Analysis
    - Biomaterial
    - Assay
    - AnalysisSet
    - Contact
    range: string