Class: Biomaterial

Biological material (tissue, cell line, etc.).

URI: https://w3id.org/jgi/phytozome/Biomaterial

classDiagram class Biomaterial click Biomaterial href "../Biomaterial/" Biomaterial : biomaterial_id Biomaterial : biosourceprovider_id Biomaterial : description Biomaterial : name Biomaterial : taxon_id

Slots

Name	Cardinality and Range	Inheritance
biomaterial_id	1 Integer	direct
taxon_id	0..1 Integer	direct
biosourceprovider_id	0..1 Integer	direct
name	0..1 String	direct
description	0..1 String	direct

Identifier and Mapping Information

Annotations

property	value
source_table	biomaterial

Schema Source

from schema: https://w3id.org/jgi/phytozome

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/jgi/phytozome/Biomaterial
native	https://w3id.org/jgi/phytozome/Biomaterial

LinkML Source

Direct

name: Biomaterial
annotations:
  source_table:
    tag: source_table
    value: biomaterial
description: Biological material (tissue, cell line, etc.).
from_schema: https://w3id.org/jgi/phytozome
attributes:
  biomaterial_id:
    name: biomaterial_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    identifier: true
    domain_of:
    - Biomaterial
    - BiomaterialProp
    - BiomaterialTreatment
    - AssayBiomaterial
    range: integer
    required: true
  taxon_id:
    name: taxon_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    domain_of:
    - Biomaterial
    range: integer
  biosourceprovider_id:
    name: biosourceprovider_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    domain_of:
    - Biomaterial
    range: integer
  name:
    name: name
    from_schema: https://w3id.org/jgi/phytozome
    domain_of:
    - Feature
    - Analysis
    - CV
    - CVTerm
    - Biomaterial
    - CellLine
    - Assay
    - ArrayDesign
    - Acquisition
    - AnalysisSet
    - AnalysisGrp
    - Contact
    range: string
  description:
    name: description
    from_schema: https://w3id.org/jgi/phytozome
    domain_of:
    - Analysis
    - Biomaterial
    - Assay
    - AnalysisSet
    - Contact
    range: string

Induced

name: Biomaterial
annotations:
  source_table:
    tag: source_table
    value: biomaterial
description: Biological material (tissue, cell line, etc.).
from_schema: https://w3id.org/jgi/phytozome
attributes:
  biomaterial_id:
    name: biomaterial_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    identifier: true
    alias: biomaterial_id
    owner: Biomaterial
    domain_of:
    - Biomaterial
    - BiomaterialProp
    - BiomaterialTreatment
    - AssayBiomaterial
    range: integer
    required: true
  taxon_id:
    name: taxon_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    alias: taxon_id
    owner: Biomaterial
    domain_of:
    - Biomaterial
    range: integer
  biosourceprovider_id:
    name: biosourceprovider_id
    from_schema: https://w3id.org/jgi/phytozome
    rank: 1000
    alias: biosourceprovider_id
    owner: Biomaterial
    domain_of:
    - Biomaterial
    range: integer
  name:
    name: name
    from_schema: https://w3id.org/jgi/phytozome
    alias: name
    owner: Biomaterial
    domain_of:
    - Feature
    - Analysis
    - CV
    - CVTerm
    - Biomaterial
    - CellLine
    - Assay
    - ArrayDesign
    - Acquisition
    - AnalysisSet
    - AnalysisGrp
    - Contact
    range: string
  description:
    name: description
    from_schema: https://w3id.org/jgi/phytozome
    alias: description
    owner: Biomaterial
    domain_of:
    - Analysis
    - Biomaterial
    - Assay
    - AnalysisSet
    - Contact
    range: string