Class: Analysis

Analysis workflow or pipeline run.

URI: https://w3id.org/jgi/sdm_metadata/Analysis

classDiagram class Analysis click Analysis href "../Analysis/" Analysis : id Analysis : name Analysis : status Analysis : template_id

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 String	Analysis identifier	direct
name	0..1 String		direct
template_id	0..1 String		direct
status	0..1 String		direct

Identifier and Mapping Information

Annotations

property	value
source_table	analysis

Schema Source

from schema: https://w3id.org/jgi/sdm_metadata

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/jgi/sdm_metadata/Analysis
native	https://w3id.org/jgi/sdm_metadata/Analysis

LinkML Source

Direct

name: Analysis
annotations:
  source_table:
    tag: source_table
    value: analysis
description: Analysis workflow or pipeline run.
from_schema: https://w3id.org/jgi/sdm_metadata
attributes:
  id:
    name: id
    description: Analysis identifier
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    identifier: true
    domain_of:
    - Analysis
    - AnalysisTemplate
    - AnalysisTagTemplate
    - AnalysisPublishingFlags
    - AnalysisPlocations
    - AnalysisCallerWarnings
    - AnalysisMacro
    - Macro
    - DataStore
    - File
    - FileIngest
    - DeletedFile
    - DeletedAnalysis
    - Metadata
    - MetadataRefresh
    - NcbiSubmission
    - NcbiTaxon
    - NcbiWorker
    - SraSubmission
    - SraUnsubmittable
    - Publication
    - Service
    - ProcessService
    - Subscription
    - SubscriptionJira
    - Template
    - User
    - Email
    - Query
    range: string
    required: true
  name:
    name: name
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    domain_of:
    - Analysis
    - AnalysisTemplate
    - AnalysisTagTemplate
    - Macro
    - DataStore
    - File
    - NcbiTaxon
    - Service
    - Template
    - Query
    range: string
  template_id:
    name: template_id
    comments:
    - Foreign key to AnalysisTemplate.id
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    domain_of:
    - Analysis
    range: string
  status:
    name: status
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    domain_of:
    - Analysis
    - FileIngest
    - NcbiSubmission
    - NcbiWorker
    - SraSubmission
    range: string

Induced

name: Analysis
annotations:
  source_table:
    tag: source_table
    value: analysis
description: Analysis workflow or pipeline run.
from_schema: https://w3id.org/jgi/sdm_metadata
attributes:
  id:
    name: id
    description: Analysis identifier
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    identifier: true
    alias: id
    owner: Analysis
    domain_of:
    - Analysis
    - AnalysisTemplate
    - AnalysisTagTemplate
    - AnalysisPublishingFlags
    - AnalysisPlocations
    - AnalysisCallerWarnings
    - AnalysisMacro
    - Macro
    - DataStore
    - File
    - FileIngest
    - DeletedFile
    - DeletedAnalysis
    - Metadata
    - MetadataRefresh
    - NcbiSubmission
    - NcbiTaxon
    - NcbiWorker
    - SraSubmission
    - SraUnsubmittable
    - Publication
    - Service
    - ProcessService
    - Subscription
    - SubscriptionJira
    - Template
    - User
    - Email
    - Query
    range: string
  name:
    name: name
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    alias: name
    owner: Analysis
    domain_of:
    - Analysis
    - AnalysisTemplate
    - AnalysisTagTemplate
    - Macro
    - DataStore
    - File
    - NcbiTaxon
    - Service
    - Template
    - Query
    range: string
  template_id:
    name: template_id
    comments:
    - Foreign key to AnalysisTemplate.id
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    alias: template_id
    owner: Analysis
    domain_of:
    - Analysis
    range: string
  status:
    name: status
    from_schema: https://w3id.org/jgi/sdm_metadata
    rank: 1000
    alias: status
    owner: Analysis
    domain_of:
    - Analysis
    - FileIngest
    - NcbiSubmission
    - NcbiWorker
    - SraSubmission
    range: string