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Class: BGCClass

Secondary metabolite class (NRPS, PKS, terpene, etc.).

URI: https://w3id.org/jgi/smc/BGCClass

classDiagram class BGCClass click BGCClass href "../BGCClass/" BGCClass : description BGCClass : id BGCClass : name

Slots

Name Cardinality and Range Description Inheritance
id 1
Integer		 direct
name 0..1
String		 Class name (e direct
description 0..1
String		 direct

Identifier and Mapping Information

Annotations

property value
source_table bgc_class

Schema Source

  • from schema: https://w3id.org/jgi/smc

Mappings

Mapping Type Mapped Value
self https://w3id.org/jgi/smc/BGCClass
native https://w3id.org/jgi/smc/BGCClass

LinkML Source

Direct

name: BGCClass
annotations:
  source_table:
    tag: source_table
    value: bgc_class
description: Secondary metabolite class (NRPS, PKS, terpene, etc.).
from_schema: https://w3id.org/jgi/smc
attributes:
  id:
    name: id
    from_schema: https://w3id.org/jgi/smc
    identifier: true
    domain_of:
    - BGC
    - BGCClass
    - BGCAnalysis
    - BGCAnalysisToSecmetFile
    - BGCAnnotation
    - AnalysisTool
    - Contig
    - Gene
    - Collection
    - CollectionMember
    - Comment
    - Blog
    - Activity
    - ApiUsage
    range: integer
    required: true
  name:
    name: name
    description: Class name (e.g., NRPS, PKS-T1, terpene)
    from_schema: https://w3id.org/jgi/smc
    domain_of:
    - BGC
    - BGCClass
    - AnalysisTool
    - Contig
    - Collection
    range: string
  description:
    name: description
    from_schema: https://w3id.org/jgi/smc
    rank: 1000
    domain_of:
    - BGCClass
    - Collection
    range: string

Induced

name: BGCClass
annotations:
  source_table:
    tag: source_table
    value: bgc_class
description: Secondary metabolite class (NRPS, PKS, terpene, etc.).
from_schema: https://w3id.org/jgi/smc
attributes:
  id:
    name: id
    from_schema: https://w3id.org/jgi/smc
    identifier: true
    alias: id
    owner: BGCClass
    domain_of:
    - BGC
    - BGCClass
    - BGCAnalysis
    - BGCAnalysisToSecmetFile
    - BGCAnnotation
    - AnalysisTool
    - Contig
    - Gene
    - Collection
    - CollectionMember
    - Comment
    - Blog
    - Activity
    - ApiUsage
    range: integer
    required: true
  name:
    name: name
    description: Class name (e.g., NRPS, PKS-T1, terpene)
    from_schema: https://w3id.org/jgi/smc
    alias: name
    owner: BGCClass
    domain_of:
    - BGC
    - BGCClass
    - AnalysisTool
    - Contig
    - Collection
    range: string
  description:
    name: description
    from_schema: https://w3id.org/jgi/smc
    rank: 1000
    alias: description
    owner: BGCClass
    domain_of:
    - BGCClass
    - Collection
    range: string