Skip to content

Class: ASV

Amplicon Sequence Variant from 16S rRNA gene sequencing. Exact sequence variants without clustering.

URI: https://w3id.org/kbase/enigma_coral/ASV

classDiagram class ASV click ASV href "../ASV/" ASV : sdt_asv_id

Slots

Name Cardinality and Range Description Inheritance
sdt_asv_id 1
String		 ASV identifier direct

Identifier and Mapping Information

Annotations

property value
source_table sdt_asv

Schema Source

  • from schema: https://w3id.org/kbase/enigma_coral

Mappings

Mapping Type Mapped Value
self https://w3id.org/kbase/enigma_coral/ASV
native https://w3id.org/kbase/enigma_coral/ASV

LinkML Source

Direct

name: ASV
annotations:
  source_table:
    tag: source_table
    value: sdt_asv
description: Amplicon Sequence Variant from 16S rRNA gene sequencing. Exact sequence
  variants without clustering.
from_schema: https://w3id.org/kbase/enigma_coral
attributes:
  sdt_asv_id:
    name: sdt_asv_id
    description: ASV identifier
    from_schema: https://w3id.org/kbase/enigma_coral
    rank: 1000
    identifier: true
    domain_of:
    - ASV
    range: string
    required: true

Induced

name: ASV
annotations:
  source_table:
    tag: source_table
    value: sdt_asv
description: Amplicon Sequence Variant from 16S rRNA gene sequencing. Exact sequence
  variants without clustering.
from_schema: https://w3id.org/kbase/enigma_coral
attributes:
  sdt_asv_id:
    name: sdt_asv_id
    description: ASV identifier
    from_schema: https://w3id.org/kbase/enigma_coral
    rank: 1000
    identifier: true
    alias: sdt_asv_id
    owner: ASV
    domain_of:
    - ASV
    range: string
    required: true