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Enum: ScoreCategory

Categorical assessment of pathway completeness based on GapMind scoring algorithm.

URI: https://w3id.org/kbase/gapmind_pathways/ScoreCategory

Permissible Values

Value Meaning Description
present None Pathway is complete or nearly complete
partial None Pathway is partially present
not_present None Pathway is absent or too incomplete to be functional

Slots

Name Description
score_category Categorical assessment of pathway completeness

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/kbase/gapmind_pathways

LinkML Source

name: ScoreCategory
description: Categorical assessment of pathway completeness based on GapMind scoring
  algorithm.
from_schema: https://w3id.org/kbase/gapmind_pathways
rank: 1000
permissible_values:
  present:
    text: present
    description: Pathway is complete or nearly complete. High confidence that the
      organism can perform this metabolic function.
  partial:
    text: partial
    description: Pathway is partially present. Some genes found but pathway may not
      be fully functional.
  not_present:
    text: not_present
    description: Pathway is absent or too incomplete to be functional. Organism likely
      cannot perform this metabolic function.