Enum: SequenceScope

Sequence scope for pathway assessment - core or auxiliary genes.

URI: https://w3id.org/kbase/gapmind_pathways/SequenceScope

Permissible Values

Value	Meaning	Description
core	None	Core pathway genes required for the metabolic function
aux	None	Auxiliary genes that support but are not essential for the pathway

Slots

Name	Description
sequence_scope	Whether assessing core or auxiliary pathway genes

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/kbase/gapmind_pathways

LinkML Source

name: SequenceScope
description: Sequence scope for pathway assessment - core or auxiliary genes.
from_schema: https://w3id.org/kbase/gapmind_pathways
rank: 1000
permissible_values:
  core:
    text: core
    description: Core pathway genes required for the metabolic function. Essential
      enzymes in the pathway.
  aux:
    text: aux
    description: Auxiliary genes that support but are not essential for the pathway.
      May include transporters or regulatory genes.