Slot: score
Overall pathway completeness score. Calculated from gene hits with weighting: positive = likely complete, negative = likely incomplete.
URI: https://w3id.org/kbase/gapmind_pathways/score
Alias: score
Applicable Classes
| Name |
Description |
Modifies Slot |
| GapmindPathway |
GapMind pathway completeness assessment for a genome |
no |
Properties
Examples
Schema Source
- from schema: https://w3id.org/kbase/gapmind_pathways
Mappings
| Mapping Type |
Mapped Value |
| self |
https://w3id.org/kbase/gapmind_pathways/score |
| native |
https://w3id.org/kbase/gapmind_pathways/score |
LinkML Source
name: score
description: 'Overall pathway completeness score. Calculated from gene hits with weighting:
positive = likely complete, negative = likely incomplete.'
examples:
- value: '-16'
description: Very incomplete (only low hits)
- value: '-2'
description: Incomplete
- value: '-6'
description: Incomplete
- value: '10'
description: Complete pathway
from_schema: https://w3id.org/kbase/gapmind_pathways
rank: 1000
alias: score
owner: GapmindPathway
domain_of:
- GapmindPathway
range: integer