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Class: Feature

URI: https://w3id.org/kbase/kbase_genomes/Feature

classDiagram class Feature click Feature href "../Feature/" Feature : cds_phase Feature : e_value Feature : end Feature : feature_id Feature : hash Feature : p_value Feature : protocol_id Feature : source_database Feature : start Feature : strand Feature : type

Slots

Name Cardinality and Range Description Inheritance
feature_id 1
String		 direct
hash 0..1
String		 direct
cds_phase 0..1
String		 direct
e_value 0..1
String		 direct
p_value 0..1
String		 direct
start 0..1
String		 direct
end 0..1
String		 direct
strand 0..1
String		 direct
source_database 0..1
String		 direct
protocol_id 0..1
String		 direct
type 0..1
String		 direct

Identifier and Mapping Information

Annotations

property value
source_table feature

Schema Source

  • from schema: https://w3id.org/kbase/kbase_genomes

Mappings

Mapping Type Mapped Value
self https://w3id.org/kbase/kbase_genomes/Feature
native https://w3id.org/kbase/kbase_genomes/Feature

LinkML Source

Direct

name: Feature
annotations:
  source_table:
    tag: source_table
    value: feature
from_schema: https://w3id.org/kbase/kbase_genomes
attributes:
  feature_id:
    name: feature_id
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    identifier: true
    domain_of:
    - Feature
    - ContigCollectionXFeature
    - ContigXFeature
    - EncodedFeatureXFeature
    - FeatureXProtein
    range: string
    required: true
  hash:
    name: hash
    from_schema: https://w3id.org/kbase/kbase_genomes
    domain_of:
    - Contig
    - ContigCollection
    - Feature
    - EncodedFeature
    - Protein
    range: string
  cds_phase:
    name: cds_phase
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    range: string
  e_value:
    name: e_value
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    range: string
  p_value:
    name: p_value
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    range: string
  start:
    name: start
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    range: string
  end:
    name: end
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    range: string
  strand:
    name: strand
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    range: string
  source_database:
    name: source_database
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    range: string
  protocol_id:
    name: protocol_id
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    identifier: false
    domain_of:
    - Feature
    range: string
  type:
    name: type
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Feature
    - EncodedFeature
    range: string

Induced

name: Feature
annotations:
  source_table:
    tag: source_table
    value: feature
from_schema: https://w3id.org/kbase/kbase_genomes
attributes:
  feature_id:
    name: feature_id
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    identifier: true
    alias: feature_id
    owner: Feature
    domain_of:
    - Feature
    - ContigCollectionXFeature
    - ContigXFeature
    - EncodedFeatureXFeature
    - FeatureXProtein
    range: string
    required: true
  hash:
    name: hash
    from_schema: https://w3id.org/kbase/kbase_genomes
    alias: hash
    owner: Feature
    domain_of:
    - Contig
    - ContigCollection
    - Feature
    - EncodedFeature
    - Protein
    range: string
  cds_phase:
    name: cds_phase
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: cds_phase
    owner: Feature
    domain_of:
    - Feature
    range: string
  e_value:
    name: e_value
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: e_value
    owner: Feature
    domain_of:
    - Feature
    range: string
  p_value:
    name: p_value
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: p_value
    owner: Feature
    domain_of:
    - Feature
    range: string
  start:
    name: start
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: start
    owner: Feature
    domain_of:
    - Feature
    range: string
  end:
    name: end
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: end
    owner: Feature
    domain_of:
    - Feature
    range: string
  strand:
    name: strand
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: strand
    owner: Feature
    domain_of:
    - Feature
    range: string
  source_database:
    name: source_database
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: source_database
    owner: Feature
    domain_of:
    - Feature
    range: string
  protocol_id:
    name: protocol_id
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    identifier: false
    alias: protocol_id
    owner: Feature
    domain_of:
    - Feature
    range: string
  type:
    name: type
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: type
    owner: Feature
    domain_of:
    - Feature
    - EncodedFeature
    range: string