Class: Protein

URI: https://w3id.org/kbase/kbase_genomes/Protein

classDiagram class Protein click Protein href "../Protein/" Protein : description Protein : evidence_for_existence Protein : hash Protein : length Protein : protein_id Protein : sequence

Slots

Name	Cardinality and Range	Inheritance
protein_id	1 String	direct
hash	0..1 String	direct
description	0..1 String	direct
evidence_for_existence	0..1 String	direct
length	0..1 String	direct
sequence	0..1 String	direct

Identifier and Mapping Information

Annotations

property	value
source_table	protein

Schema Source

from schema: https://w3id.org/kbase/kbase_genomes

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/kbase_genomes/Protein
native	https://w3id.org/kbase/kbase_genomes/Protein

LinkML Source

Direct

name: Protein
annotations:
  source_table:
    tag: source_table
    value: protein
from_schema: https://w3id.org/kbase/kbase_genomes
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/kbase_genomes
    identifier: true
    domain_of:
    - ContigXProtein
    - ContigCollectionXProtein
    - FeatureXProtein
    - EncodedFeatureXProtein
    - Protein
    range: string
    required: true
  hash:
    name: hash
    from_schema: https://w3id.org/kbase/kbase_genomes
    domain_of:
    - Contig
    - ContigCollection
    - Feature
    - EncodedFeature
    - Protein
    range: string
  description:
    name: description
    from_schema: https://w3id.org/kbase/kbase_genomes
    domain_of:
    - Name
    - Protein
    range: string
  evidence_for_existence:
    name: evidence_for_existence
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Protein
    range: string
  length:
    name: length
    from_schema: https://w3id.org/kbase/kbase_genomes
    domain_of:
    - Contig
    - Protein
    range: string
  sequence:
    name: sequence
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    domain_of:
    - Protein
    range: string

Induced

name: Protein
annotations:
  source_table:
    tag: source_table
    value: protein
from_schema: https://w3id.org/kbase/kbase_genomes
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/kbase_genomes
    identifier: true
    alias: protein_id
    owner: Protein
    domain_of:
    - ContigXProtein
    - ContigCollectionXProtein
    - FeatureXProtein
    - EncodedFeatureXProtein
    - Protein
    range: string
    required: true
  hash:
    name: hash
    from_schema: https://w3id.org/kbase/kbase_genomes
    alias: hash
    owner: Protein
    domain_of:
    - Contig
    - ContigCollection
    - Feature
    - EncodedFeature
    - Protein
    range: string
  description:
    name: description
    from_schema: https://w3id.org/kbase/kbase_genomes
    alias: description
    owner: Protein
    domain_of:
    - Name
    - Protein
    range: string
  evidence_for_existence:
    name: evidence_for_existence
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: evidence_for_existence
    owner: Protein
    domain_of:
    - Protein
    range: string
  length:
    name: length
    from_schema: https://w3id.org/kbase/kbase_genomes
    alias: length
    owner: Protein
    domain_of:
    - Contig
    - Protein
    range: string
  sequence:
    name: sequence
    from_schema: https://w3id.org/kbase/kbase_genomes
    rank: 1000
    alias: sequence
    owner: Protein
    domain_of:
    - Protein
    range: string