Slot: ANI
Average Nucleotide Identity as percentage. Based on aligned fragments between genomes.
URI: https://w3id.org/kbase/kbase_ke_pangenome/ANI Alias: ANI
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| GenomeAni | Pairwise Average Nucleotide Identity (ANI) between genomes within species cla... | no |
Properties
-
Range: Float
-
Minimum Value: 0
-
Maximum Value: 100
Examples
| Value |
|---|
| 99.0353 |
| 99.0835 |
| 95.5 |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/kbase/kbase_ke_pangenome
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | https://w3id.org/kbase/kbase_ke_pangenome/ANI |
| native | https://w3id.org/kbase/kbase_ke_pangenome/ANI |
LinkML Source
name: ANI
description: Average Nucleotide Identity as percentage. Based on aligned fragments
between genomes.
examples:
- value: '99.0353'
description: Same species, different strains
- value: '99.0835'
- value: '95.5'
description: Near species boundary
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
alias: ANI
owner: GenomeAni
domain_of:
- GenomeAni
range: float
minimum_value: 0.0
maximum_value: 100.0