Slot: ANI_circumscription_radius

ANI threshold for species membership. Typically 95% for most species. Some species have tighter boundaries (higher values).

URI: https://w3id.org/kbase/kbase_ke_pangenome/ANI_circumscription_radius Alias: ANI_circumscription_radius

Applicable Classes

Name	Description	Modifies Slot
GtdbSpeciesClade	GTDB species-level grouping with representative genome	no

Properties

• Range: Float

• Minimum Value: 90

• Maximum Value: 100

Examples

Value
95.0
95.239
97.08

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/kbase/kbase_ke_pangenome

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/kbase_ke_pangenome/ANI_circumscription_radius
native	https://w3id.org/kbase/kbase_ke_pangenome/ANI_circumscription_radius

LinkML Source

name: ANI_circumscription_radius
description: ANI threshold for species membership. Typically 95% for most species.
  Some species have tighter boundaries (higher values).
examples:
- value: '95.0'
  description: Standard species threshold
- value: '95.239'
  description: K. pneumoniae threshold
- value: '97.08'
  description: Tighter threshold for clonal species
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
alias: ANI_circumscription_radius
owner: GtdbSpeciesClade
domain_of:
- GtdbSpeciesClade
range: float
minimum_value: 90.0
maximum_value: 100.0
unit:
  ucum_code: '%'