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Enum: GapmindMetabolicCategory

GapMind metabolic pathway categories. Two main types assessed.

URI: https://w3id.org/kbase/kbase_ke_pangenome/GapmindMetabolicCategory

Permissible Values

Value Meaning Description
aa None Amino acid biosynthesis/catabolism
carbon None Carbon source utilization

Slots

Name Description
metabolic_category Category - amino acid (aa) or carbon source

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/kbase/kbase_ke_pangenome

LinkML Source

name: GapmindMetabolicCategory
description: GapMind metabolic pathway categories. Two main types assessed.
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
permissible_values:
  aa:
    text: aa
    description: 'Amino acid biosynthesis/catabolism. Includes: alanine, arginine,
      asparagine, cysteine, glutamate, glycine, histidine, isoleucine, leucine, lysine,
      methionine, phenylalanine, proline, serine, threonine, tryptophan, tyrosine,
      valine'
  carbon:
    text: carbon
    description: 'Carbon source utilization. Includes: glucose, fructose, sucrose,
      lactose, maltose, trehalose, galactose, mannose, arabinose, xylose, rhamnose,
      gluconate, glucuronate, galacturonate, citrate, pyruvate, acetate, ethanol,
      glycerol, lactate, propionate'