Slot: contig_count

Number of contigs in assembly. Complete genomes = 1-5, drafts may have hundreds.

URI: https://w3id.org/kbase/kbase_ke_pangenome/contig_count Alias: contig_count

Applicable Classes

Name	Description	Modifies Slot
GtdbMetadata	Comprehensive GTDB metadata with quality metrics, genome statistics, and NCBI...	no

Properties

• Range: Integer

• Minimum Value: 1

Examples

Value
1
193

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/kbase/kbase_ke_pangenome

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/kbase_ke_pangenome/contig_count
native	https://w3id.org/kbase/kbase_ke_pangenome/contig_count

LinkML Source

name: contig_count
description: Number of contigs in assembly. Complete genomes = 1-5, drafts may have
  hundreds.
examples:
- value: '1'
  description: Complete genome
- value: '193'
  description: Draft assembly
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
alias: contig_count
owner: GtdbMetadata
domain_of:
- GtdbMetadata
range: integer
minimum_value: 1