Slot: faa_file_path_nersc
Absolute path to protein FASTA file at NERSC filesystem. Contains predicted protein sequences.
URI: https://w3id.org/kbase/kbase_ke_pangenome/faa_file_path_nersc
Alias: faa_file_path_nersc
Applicable Classes
| Name |
Description |
Modifies Slot |
| Genome |
Individual genome assembly from NCBI RefSeq or GenBank |
no |
Properties
Examples
| Value |
| /global/cfs/cdirs/kbase/jungbluth/Projects/Project_Pangenome_GTDB/GTDB_r214_by_spcluster/s__Staphylococcus_lugdunensis--RS_GCF_002901705.1/GCF_022568935.1_protein.faa.gz |
Schema Source
- from schema: https://w3id.org/kbase/kbase_ke_pangenome
Mappings
| Mapping Type |
Mapped Value |
| self |
https://w3id.org/kbase/kbase_ke_pangenome/faa_file_path_nersc |
| native |
https://w3id.org/kbase/kbase_ke_pangenome/faa_file_path_nersc |
LinkML Source
name: faa_file_path_nersc
description: Absolute path to protein FASTA file at NERSC filesystem. Contains predicted
protein sequences.
examples:
- value: /global/cfs/cdirs/kbase/jungbluth/Projects/Project_Pangenome_GTDB/GTDB_r214_by_spcluster/s__Staphylococcus_lugdunensis--RS_GCF_002901705.1/GCF_022568935.1_protein.faa.gz
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
alias: faa_file_path_nersc
owner: Genome
domain_of:
- Genome
range: string