Slot: fna_file_path_nersc
Absolute path to nucleotide FASTA file at NERSC filesystem. Contains genomic contigs/scaffolds.
URI: https://w3id.org/kbase/kbase_ke_pangenome/fna_file_path_nersc
Alias: fna_file_path_nersc
Applicable Classes
| Name |
Description |
Modifies Slot |
| Genome |
Individual genome assembly from NCBI RefSeq or GenBank |
no |
Properties
Examples
| Value |
| /global/cfs/cdirs/kbase/jungbluth/Projects/Project_Pangenome_GTDB/GTDB_v214_download/ftp.ncbi.nlm.nih.gov/genomes/all/GCF/022/568/935/GCF_022568935.1_ASM2256893v1/GCF_022568935.1_ASM2256893v1_genomic.fna.gz |
Schema Source
- from schema: https://w3id.org/kbase/kbase_ke_pangenome
Mappings
| Mapping Type |
Mapped Value |
| self |
https://w3id.org/kbase/kbase_ke_pangenome/fna_file_path_nersc |
| native |
https://w3id.org/kbase/kbase_ke_pangenome/fna_file_path_nersc |
LinkML Source
name: fna_file_path_nersc
description: Absolute path to nucleotide FASTA file at NERSC filesystem. Contains
genomic contigs/scaffolds.
examples:
- value: /global/cfs/cdirs/kbase/jungbluth/Projects/Project_Pangenome_GTDB/GTDB_v214_download/ftp.ncbi.nlm.nih.gov/genomes/all/GCF/022/568/935/GCF_022568935.1_ASM2256893v1/GCF_022568935.1_ASM2256893v1_genomic.fna.gz
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
alias: fna_file_path_nersc
owner: Genome
domain_of:
- Genome
range: string