Slot: genome_size
Total genome size in base pairs. Varies widely: - Minimal bacteria: ~500 kbp - Typical bacteria: 2-6 Mbp - Large bacteria: >10 Mbp
URI: https://w3id.org/kbase/kbase_ke_pangenome/genome_size Alias: genome_size
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| GtdbMetadata | Comprehensive GTDB metadata with quality metrics, genome statistics, and NCBI... | no |
Properties
-
Range: Integer
-
Minimum Value: 100000
Examples
| Value |
|---|
| 2215172 |
| 4077567 |
| 6500000 |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/kbase/kbase_ke_pangenome
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | https://w3id.org/kbase/kbase_ke_pangenome/genome_size |
| native | https://w3id.org/kbase/kbase_ke_pangenome/genome_size |
LinkML Source
name: genome_size
description: 'Total genome size in base pairs. Varies widely: - Minimal bacteria:
~500 kbp - Typical bacteria: 2-6 Mbp - Large bacteria: >10 Mbp'
examples:
- value: '2215172'
description: Small archaeal genome
- value: '4077567'
description: Medium bacterial genome
- value: '6500000'
description: Large bacterial genome
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
alias: genome_size
owner: GtdbMetadata
domain_of:
- GtdbMetadata
range: integer
minimum_value: 100000