Skip to content

Slot: mean_intra_species_ANI

Mean pairwise ANI among all genomes. Higher values indicate more clonal/homogeneous species. Lower values suggest higher diversity.

URI: https://w3id.org/kbase/kbase_ke_pangenome/mean_intra_species_ANI Alias: mean_intra_species_ANI

Applicable Classes

Name Description Modifies Slot
GtdbSpeciesClade GTDB species-level grouping with representative genome no

Properties

  • Range: Float

  • Minimum Value: 95

  • Maximum Value: 100

Examples

Value
98.97
99.5
96.5

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/kbase/kbase_ke_pangenome

Mappings

Mapping Type Mapped Value
self https://w3id.org/kbase/kbase_ke_pangenome/mean_intra_species_ANI
native https://w3id.org/kbase/kbase_ke_pangenome/mean_intra_species_ANI

LinkML Source

name: mean_intra_species_ANI
description: Mean pairwise ANI among all genomes. Higher values indicate more clonal/homogeneous
  species. Lower values suggest higher diversity.
examples:
- value: '98.97'
  description: K. pneumoniae - moderately diverse
- value: '99.5'
  description: Highly clonal species (e.g., M. tuberculosis)
- value: '96.5'
  description: Highly diverse species
from_schema: https://w3id.org/kbase/kbase_ke_pangenome
rank: 1000
alias: mean_intra_species_ANI
owner: GtdbSpeciesClade
domain_of:
- GtdbSpeciesClade
range: float
minimum_value: 95.0
maximum_value: 100.0