Class: ClusterMember

Member sequence in a cluster

URI: https://w3id.org/kbase/kbase_uniref100/ClusterMember

classDiagram class ClusterMember click ClusterMember href "../ClusterMember/" ClusterMember : cluster_id ClusterMember --> "0..1" Cluster : cluster_id click Cluster href "../Cluster/" ClusterMember : entity_id ClusterMember --> "0..1" Entity : entity_id click Entity href "../Entity/" ClusterMember : is_representative ClusterMember : is_seed ClusterMember : score

Slots

Name	Cardinality and Range	Description	Inheritance
cluster_id	0..1 Cluster	Parent cluster	direct
entity_id	0..1 Entity	Member sequence	direct
is_representative	0..1 Boolean	Whether this is the representative sequence	direct
is_seed	0..1 Boolean	Whether this is the seed sequence	direct
score	0..1 Float	Membership score	direct

Identifier and Mapping Information

Annotations

property	value
source_table	clustermember

Schema Source

from schema: https://w3id.org/kbase/kbase_uniref100

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/kbase_uniref100/ClusterMember
native	https://w3id.org/kbase/kbase_uniref100/ClusterMember

LinkML Source

Direct

name: ClusterMember
annotations:
  source_table:
    tag: source_table
    value: clustermember
description: Member sequence in a cluster
from_schema: https://w3id.org/kbase/kbase_uniref100
attributes:
  cluster_id:
    name: cluster_id
    description: Parent cluster
    from_schema: https://w3id.org/kbase/kbase_uniref100
    domain_of:
    - Cluster
    - ClusterMember
    range: Cluster
  entity_id:
    name: entity_id
    description: Member sequence
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    domain_of:
    - ClusterMember
    - Crossreference
    - Entity
    range: Entity
  is_representative:
    name: is_representative
    description: Whether this is the representative sequence
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    domain_of:
    - ClusterMember
    range: boolean
  is_seed:
    name: is_seed
    description: Whether this is the seed sequence
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    domain_of:
    - ClusterMember
    range: boolean
  score:
    name: score
    description: Membership score
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    domain_of:
    - ClusterMember
    range: float

Induced

name: ClusterMember
annotations:
  source_table:
    tag: source_table
    value: clustermember
description: Member sequence in a cluster
from_schema: https://w3id.org/kbase/kbase_uniref100
attributes:
  cluster_id:
    name: cluster_id
    description: Parent cluster
    from_schema: https://w3id.org/kbase/kbase_uniref100
    alias: cluster_id
    owner: ClusterMember
    domain_of:
    - Cluster
    - ClusterMember
    range: Cluster
  entity_id:
    name: entity_id
    description: Member sequence
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    alias: entity_id
    owner: ClusterMember
    domain_of:
    - ClusterMember
    - Crossreference
    - Entity
    range: Entity
  is_representative:
    name: is_representative
    description: Whether this is the representative sequence
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    alias: is_representative
    owner: ClusterMember
    domain_of:
    - ClusterMember
    range: boolean
  is_seed:
    name: is_seed
    description: Whether this is the seed sequence
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    alias: is_seed
    owner: ClusterMember
    domain_of:
    - ClusterMember
    range: boolean
  score:
    name: score
    description: Membership score
    from_schema: https://w3id.org/kbase/kbase_uniref100
    rank: 1000
    alias: score
    owner: ClusterMember
    domain_of:
    - ClusterMember
    range: float