Class: CrossReference

External database cross-reference for entities. Links UniRef entries to UniProt, NCBI, and other databases.

URI: https://w3id.org/kbase/kbase_uniref50/CrossReference

classDiagram class CrossReference click CrossReference href "../CrossReference/" CrossReference : entity_id CrossReference : xref_type CrossReference : xref_value

Slots

Name	Cardinality and Range	Description	Inheritance
entity_id	0..1 String	Entity being cross-referenced	direct
xref_type	0..1 String	Type of cross-reference (UniProt, NCBI, etc	direct
xref_value	0..1 String	Cross-reference identifier value	direct

Identifier and Mapping Information

Annotations

property	value
source_table	crossreference

Schema Source

from schema: https://w3id.org/kbase/kbase_uniref50

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/kbase_uniref50/CrossReference
native	https://w3id.org/kbase/kbase_uniref50/CrossReference

LinkML Source

Direct

name: CrossReference
annotations:
  source_table:
    tag: source_table
    value: crossreference
description: External database cross-reference for entities. Links UniRef entries
  to UniProt, NCBI, and other databases.
from_schema: https://w3id.org/kbase/kbase_uniref50
attributes:
  entity_id:
    name: entity_id
    description: Entity being cross-referenced
    comments:
    - Foreign key to Entity.entity_id
    from_schema: https://w3id.org/kbase/kbase_uniref50
    domain_of:
    - ClusterMember
    - CrossReference
    - Entity
    range: string
  xref_type:
    name: xref_type
    description: Type of cross-reference (UniProt, NCBI, etc.)
    from_schema: https://w3id.org/kbase/kbase_uniref50
    rank: 1000
    domain_of:
    - CrossReference
    range: string
  xref_value:
    name: xref_value
    description: Cross-reference identifier value
    from_schema: https://w3id.org/kbase/kbase_uniref50
    rank: 1000
    domain_of:
    - CrossReference
    range: string

Induced

name: CrossReference
annotations:
  source_table:
    tag: source_table
    value: crossreference
description: External database cross-reference for entities. Links UniRef entries
  to UniProt, NCBI, and other databases.
from_schema: https://w3id.org/kbase/kbase_uniref50
attributes:
  entity_id:
    name: entity_id
    description: Entity being cross-referenced
    comments:
    - Foreign key to Entity.entity_id
    from_schema: https://w3id.org/kbase/kbase_uniref50
    alias: entity_id
    owner: CrossReference
    domain_of:
    - ClusterMember
    - CrossReference
    - Entity
    range: string
  xref_type:
    name: xref_type
    description: Type of cross-reference (UniProt, NCBI, etc.)
    from_schema: https://w3id.org/kbase/kbase_uniref50
    rank: 1000
    alias: xref_type
    owner: CrossReference
    domain_of:
    - CrossReference
    range: string
  xref_value:
    name: xref_value
    description: Cross-reference identifier value
    from_schema: https://w3id.org/kbase/kbase_uniref50
    rank: 1000
    alias: xref_value
    owner: CrossReference
    domain_of:
    - CrossReference
    range: string