Class: GottchaGold
GOTTCHA taxonomic classifications for GOLD samples. Gene-independent taxonomic classifier using unique signature k-mers.
TOOL: GOTTCHA (Freitas et al. 2015) - Uses unique k-mers per taxon - High specificity - Good for strain-level identification
URI: https://w3id.org/kbase/nmdc_core/GottchaGold
classDiagram
class GottchaGold
click GottchaGold href "../GottchaGold/"
Slots
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| source_table | gottcha_gold |
Schema Source
- from schema: https://w3id.org/kbase/nmdc_core
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | https://w3id.org/kbase/nmdc_core/GottchaGold |
| native | https://w3id.org/kbase/nmdc_core/GottchaGold |
LinkML Source
Direct
name: GottchaGold
annotations:
source_table:
tag: source_table
value: gottcha_gold
description: 'GOTTCHA taxonomic classifications for GOLD samples. Gene-independent
taxonomic classifier using unique signature k-mers.
TOOL: GOTTCHA (Freitas et al. 2015) - Uses unique k-mers per taxon - High specificity
- Good for strain-level identification'
from_schema: https://w3id.org/kbase/nmdc_core
Induced
name: GottchaGold
annotations:
source_table:
tag: source_table
value: gottcha_gold
description: 'GOTTCHA taxonomic classifications for GOLD samples. Gene-independent
taxonomic classifier using unique signature k-mers.
TOOL: GOTTCHA (Freitas et al. 2015) - Uses unique k-mers per taxon - High specificity
- Good for strain-level identification'
from_schema: https://w3id.org/kbase/nmdc_core