Class: KrakenGold
Kraken taxonomic classifications for GOLD samples. K-mer based taxonomic classifier with high speed and accuracy.
TOOL: Kraken2 (Wood et al. 2019) - Industry standard classifier - Very fast (millions of reads/minute) - Comprehensive database options
URI: https://w3id.org/kbase/nmdc_core/KrakenGold
classDiagram
class KrakenGold
click KrakenGold href "../KrakenGold/"
Slots
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| source_table | kraken_gold |
Schema Source
- from schema: https://w3id.org/kbase/nmdc_core
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | https://w3id.org/kbase/nmdc_core/KrakenGold |
| native | https://w3id.org/kbase/nmdc_core/KrakenGold |
LinkML Source
Direct
name: KrakenGold
annotations:
source_table:
tag: source_table
value: kraken_gold
description: 'Kraken taxonomic classifications for GOLD samples. K-mer based taxonomic
classifier with high speed and accuracy.
TOOL: Kraken2 (Wood et al. 2019) - Industry standard classifier - Very fast (millions
of reads/minute) - Comprehensive database options'
from_schema: https://w3id.org/kbase/nmdc_core
Induced
name: KrakenGold
annotations:
source_table:
tag: source_table
value: kraken_gold
description: 'Kraken taxonomic classifications for GOLD samples. K-mer based taxonomic
classifier with high speed and accuracy.
TOOL: Kraken2 (Wood et al. 2019) - Industry standard classifier - Very fast (millions
of reads/minute) - Comprehensive database options'
from_schema: https://w3id.org/kbase/nmdc_core