Class: RheaReactions

Rhea biochemical reactions database. Provides detailed reaction information with balanced equations and enzyme links.

RHEA ID STRUCTURE: - RHEA_ID_MASTER: Main reaction ID - RHEA_ID_LR: Left-to-right direction - RHEA_ID_RL: Right-to-left direction - RHEA_ID_BI: Bidirectional

EXAMPLE: Reaction 10000 has IDs 10001 (L->R), 10002 (R->L), 10003 (bi)

URI: https://w3id.org/kbase/nmdc_core/RheaReactions

classDiagram class RheaReactions click RheaReactions href "../RheaReactions/" RheaReactions : RHEA_ID_BI RheaReactions : RHEA_ID_LR RheaReactions : RHEA_ID_MASTER RheaReactions : RHEA_ID_RL

Slots

Name	Cardinality and Range	Description	Inheritance
RHEA_ID_MASTER	1 Integer	Master reaction ID	direct
RHEA_ID_LR	0..1 Integer	Left-to-right reaction ID	direct
RHEA_ID_RL	0..1 Integer	Right-to-left reaction ID	direct
RHEA_ID_BI	0..1 Integer	Bidirectional reaction ID	direct

Identifier and Mapping Information

Annotations

property	value
source_table	rhea_reactions

Schema Source

from schema: https://w3id.org/kbase/nmdc_core

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/nmdc_core/RheaReactions
native	https://w3id.org/kbase/nmdc_core/RheaReactions

LinkML Source

Direct

name: RheaReactions
annotations:
  source_table:
    tag: source_table
    value: rhea_reactions
description: 'Rhea biochemical reactions database. Provides detailed reaction information
  with balanced equations and enzyme links.

  RHEA ID STRUCTURE: - RHEA_ID_MASTER: Main reaction ID - RHEA_ID_LR: Left-to-right
  direction - RHEA_ID_RL: Right-to-left direction - RHEA_ID_BI: Bidirectional

  EXAMPLE: Reaction 10000 has IDs 10001 (L->R), 10002 (R->L), 10003 (bi)'
from_schema: https://w3id.org/kbase/nmdc_core
attributes:
  RHEA_ID_MASTER:
    name: RHEA_ID_MASTER
    description: Master reaction ID
    examples:
    - value: '10000'
    - value: '10004'
    - value: '10008'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    identifier: true
    domain_of:
    - RheaReactions
    range: integer
    required: true
  RHEA_ID_LR:
    name: RHEA_ID_LR
    description: Left-to-right reaction ID
    examples:
    - value: '10001'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    domain_of:
    - RheaReactions
    range: integer
  RHEA_ID_RL:
    name: RHEA_ID_RL
    description: Right-to-left reaction ID
    examples:
    - value: '10002'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    domain_of:
    - RheaReactions
    range: integer
  RHEA_ID_BI:
    name: RHEA_ID_BI
    description: Bidirectional reaction ID
    examples:
    - value: '10003'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    domain_of:
    - RheaReactions
    range: integer

Induced

name: RheaReactions
annotations:
  source_table:
    tag: source_table
    value: rhea_reactions
description: 'Rhea biochemical reactions database. Provides detailed reaction information
  with balanced equations and enzyme links.

  RHEA ID STRUCTURE: - RHEA_ID_MASTER: Main reaction ID - RHEA_ID_LR: Left-to-right
  direction - RHEA_ID_RL: Right-to-left direction - RHEA_ID_BI: Bidirectional

  EXAMPLE: Reaction 10000 has IDs 10001 (L->R), 10002 (R->L), 10003 (bi)'
from_schema: https://w3id.org/kbase/nmdc_core
attributes:
  RHEA_ID_MASTER:
    name: RHEA_ID_MASTER
    description: Master reaction ID
    examples:
    - value: '10000'
    - value: '10004'
    - value: '10008'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    identifier: true
    alias: RHEA_ID_MASTER
    owner: RheaReactions
    domain_of:
    - RheaReactions
    range: integer
    required: true
  RHEA_ID_LR:
    name: RHEA_ID_LR
    description: Left-to-right reaction ID
    examples:
    - value: '10001'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    alias: RHEA_ID_LR
    owner: RheaReactions
    domain_of:
    - RheaReactions
    range: integer
  RHEA_ID_RL:
    name: RHEA_ID_RL
    description: Right-to-left reaction ID
    examples:
    - value: '10002'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    alias: RHEA_ID_RL
    owner: RheaReactions
    domain_of:
    - RheaReactions
    range: integer
  RHEA_ID_BI:
    name: RHEA_ID_BI
    description: Bidirectional reaction ID
    examples:
    - value: '10003'
    from_schema: https://w3id.org/kbase/nmdc_core
    rank: 1000
    alias: RHEA_ID_BI
    owner: RheaReactions
    domain_of:
    - RheaReactions
    range: integer