Slot: rule_definition

For rule-based sources, the logical rule definition. Uses IMG pathway IDs with operators: | (OR), , (AND), ! (NOT).

URI: https://w3id.org/kbase/nmdc_core/rule_definition Alias: rule_definition

Applicable Classes

Name	Description	Modifies Slot
TraitSources	Sources for trait data (databases, literature, predictions)	no

Properties

• Range: String

Examples

Value
(768
(!162)
(798)

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/kbase/nmdc_core

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/nmdc_core/rule_definition
native	https://w3id.org/kbase/nmdc_core/rule_definition

LinkML Source

name: rule_definition
description: 'For rule-based sources, the logical rule definition. Uses IMG pathway
  IDs with operators: | (OR), , (AND), ! (NOT).'
examples:
- value: (768|769|770)
  description: Aerobe = has cytochrome c oxidase pathway
- value: (!162)
  description: His auxotroph = lacks histidine biosynthesis
- value: (798)
  description: Nitrogen fixer = has nitrogenase pathway
from_schema: https://w3id.org/kbase/nmdc_core
rank: 1000
alias: rule_definition
owner: TraitSources
domain_of:
- TraitSources
range: string