Class: COGClass

COG (Clusters of Orthologous Groups) functional class. Single-letter codes (A-Z) for broad functional categories.

URI: https://w3id.org/kbase/phagefoundry_genome_browser/COGClass

classDiagram class COGClass click COGClass href "../COGClass/" COGClass : id COGClass : name

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 Integer		direct
name	0..1 String	COG class letter and name	direct

Identifier and Mapping Information

Annotations

property	value
source_table	browser_cog_class

Schema Source

from schema: https://w3id.org/kbase/phagefoundry_genome_browser

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/phagefoundry_genome_browser/COGClass
native	https://w3id.org/kbase/phagefoundry_genome_browser/COGClass

LinkML Source

Direct

name: COGClass
annotations:
  source_table:
    tag: source_table
    value: browser_cog_class
description: COG (Clusters of Orthologous Groups) functional class. Single-letter
  codes (A-Z) for broad functional categories.
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    identifier: true
    domain_of:
    - Genome
    - Contig
    - Gene
    - Protein
    - Annotation
    - CAZyFamily
    - COGClass
    - ECNumber
    - EggNOGDescription
    - GOTerm
    - KEGGOrtholog
    - KEGGPathway
    - KEGGReaction
    - Operon
    - OrthologGroup
    - Regulon
    - RegulonRegulator
    - Sample
    - SampleMetadata
    - Site
    - GenomeTag
    range: integer
    required: true
  name:
    name: name
    description: COG class letter and name
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    domain_of:
    - Genome
    - Contig
    - Protein
    - CAZyFamily
    - COGClass
    - ECNumber
    - GOTerm
    - Operon
    - OrthologGroup
    - Regulon
    - Sample
    - Site
    range: string

Induced

name: COGClass
annotations:
  source_table:
    tag: source_table
    value: browser_cog_class
description: COG (Clusters of Orthologous Groups) functional class. Single-letter
  codes (A-Z) for broad functional categories.
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    identifier: true
    alias: id
    owner: COGClass
    domain_of:
    - Genome
    - Contig
    - Gene
    - Protein
    - Annotation
    - CAZyFamily
    - COGClass
    - ECNumber
    - EggNOGDescription
    - GOTerm
    - KEGGOrtholog
    - KEGGPathway
    - KEGGReaction
    - Operon
    - OrthologGroup
    - Regulon
    - RegulonRegulator
    - Sample
    - SampleMetadata
    - Site
    - GenomeTag
    range: integer
    required: true
  name:
    name: name
    description: COG class letter and name
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    alias: name
    owner: COGClass
    domain_of:
    - Genome
    - Contig
    - Protein
    - CAZyFamily
    - COGClass
    - ECNumber
    - GOTerm
    - Operon
    - OrthologGroup
    - Regulon
    - Sample
    - Site
    range: string