Class: ProteinCAZyFamily

Protein to CAZy family assignments

URI: https://w3id.org/kbase/phagefoundry_genome_browser/ProteinCAZyFamily

classDiagram class ProteinCAZyFamily click ProteinCAZyFamily href "../ProteinCAZyFamily/" ProteinCAZyFamily : cazy_family_id ProteinCAZyFamily : protein_id

Slots

Name	Cardinality and Range	Description	Inheritance
protein_id	0..1 Integer		direct
cazy_family_id	0..1 Integer		direct

Identifier and Mapping Information

Annotations

property	value
source_table	browser_protein_cazy_families

Schema Source

from schema: https://w3id.org/kbase/phagefoundry_genome_browser

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/phagefoundry_genome_browser/ProteinCAZyFamily
native	https://w3id.org/kbase/phagefoundry_genome_browser/ProteinCAZyFamily

LinkML Source

Direct

name: ProteinCAZyFamily
annotations:
  source_table:
    tag: source_table
    value: browser_protein_cazy_families
description: Protein to CAZy family assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    comments:
    - Foreign key to Protein.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  cazy_family_id:
    name: cazy_family_id
    comments:
    - Foreign key to CAZyFamily.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    domain_of:
    - ProteinCAZyFamily
    range: integer

Induced

name: ProteinCAZyFamily
annotations:
  source_table:
    tag: source_table
    value: browser_protein_cazy_families
description: Protein to CAZy family assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    comments:
    - Foreign key to Protein.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    alias: protein_id
    owner: ProteinCAZyFamily
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  cazy_family_id:
    name: cazy_family_id
    comments:
    - Foreign key to CAZyFamily.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    alias: cazy_family_id
    owner: ProteinCAZyFamily
    domain_of:
    - ProteinCAZyFamily
    range: integer