Class: ProteinGOTerm

Protein to GO term assignments

URI: https://w3id.org/kbase/phagefoundry_genome_browser/ProteinGOTerm

classDiagram class ProteinGOTerm click ProteinGOTerm href "../ProteinGOTerm/" ProteinGOTerm : go_term_id ProteinGOTerm : protein_id

Slots

Name	Cardinality and Range	Description	Inheritance
protein_id	0..1 Integer		direct
go_term_id	0..1 Integer		direct

Identifier and Mapping Information

Annotations

property	value
source_table	browser_protein_go_terms

Schema Source

from schema: https://w3id.org/kbase/phagefoundry_genome_browser

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/phagefoundry_genome_browser/ProteinGOTerm
native	https://w3id.org/kbase/phagefoundry_genome_browser/ProteinGOTerm

LinkML Source

Direct

name: ProteinGOTerm
annotations:
  source_table:
    tag: source_table
    value: browser_protein_go_terms
description: Protein to GO term assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  go_term_id:
    name: go_term_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    domain_of:
    - ProteinGOTerm
    range: integer

Induced

name: ProteinGOTerm
annotations:
  source_table:
    tag: source_table
    value: browser_protein_go_terms
description: Protein to GO term assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    alias: protein_id
    owner: ProteinGOTerm
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  go_term_id:
    name: go_term_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    alias: go_term_id
    owner: ProteinGOTerm
    domain_of:
    - ProteinGOTerm
    range: integer