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Class: ProteinKEGGPathway

Protein to KEGG pathway assignments

URI: https://w3id.org/kbase/phagefoundry_genome_browser/ProteinKEGGPathway

classDiagram class ProteinKEGGPathway click ProteinKEGGPathway href "../ProteinKEGGPathway/" ProteinKEGGPathway : kegg_pathway_id ProteinKEGGPathway : protein_id

Slots

Name Cardinality and Range Description Inheritance
protein_id 0..1
Integer		 direct
kegg_pathway_id 0..1
Integer		 direct

Identifier and Mapping Information

Annotations

property value
source_table browser_protein_kegg_pathways

Schema Source

  • from schema: https://w3id.org/kbase/phagefoundry_genome_browser

Mappings

Mapping Type Mapped Value
self https://w3id.org/kbase/phagefoundry_genome_browser/ProteinKEGGPathway
native https://w3id.org/kbase/phagefoundry_genome_browser/ProteinKEGGPathway

LinkML Source

Direct

name: ProteinKEGGPathway
annotations:
  source_table:
    tag: source_table
    value: browser_protein_kegg_pathways
description: Protein to KEGG pathway assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  kegg_pathway_id:
    name: kegg_pathway_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    domain_of:
    - ProteinKEGGPathway
    range: integer

Induced

name: ProteinKEGGPathway
annotations:
  source_table:
    tag: source_table
    value: browser_protein_kegg_pathways
description: Protein to KEGG pathway assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    alias: protein_id
    owner: ProteinKEGGPathway
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  kegg_pathway_id:
    name: kegg_pathway_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    alias: kegg_pathway_id
    owner: ProteinKEGGPathway
    domain_of:
    - ProteinKEGGPathway
    range: integer