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Class: ProteinTCFamily

Protein to Transporter Classification family assignments

URI: https://w3id.org/kbase/phagefoundry_genome_browser/ProteinTCFamily

classDiagram class ProteinTCFamily click ProteinTCFamily href "../ProteinTCFamily/" ProteinTCFamily : protein_id ProteinTCFamily : tc_family_id

Slots

Name Cardinality and Range Description Inheritance
protein_id 0..1
Integer		 direct
tc_family_id 0..1
Integer		 direct

Identifier and Mapping Information

Annotations

property value
source_table browser_protein_tc_families

Schema Source

  • from schema: https://w3id.org/kbase/phagefoundry_genome_browser

Mappings

Mapping Type Mapped Value
self https://w3id.org/kbase/phagefoundry_genome_browser/ProteinTCFamily
native https://w3id.org/kbase/phagefoundry_genome_browser/ProteinTCFamily

LinkML Source

Direct

name: ProteinTCFamily
annotations:
  source_table:
    tag: source_table
    value: browser_protein_tc_families
description: Protein to Transporter Classification family assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  tc_family_id:
    name: tc_family_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    domain_of:
    - ProteinTCFamily
    range: integer

Induced

name: ProteinTCFamily
annotations:
  source_table:
    tag: source_table
    value: browser_protein_tc_families
description: Protein to Transporter Classification family assignments
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  protein_id:
    name: protein_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    alias: protein_id
    owner: ProteinTCFamily
    domain_of:
    - ProteinCAZyFamily
    - ProteinCOGClass
    - ProteinECNumber
    - ProteinGOTerm
    - ProteinKEGGOrtholog
    - ProteinKEGGPathway
    - ProteinKEGGReaction
    - ProteinOrthologGroup
    - ProteinTCFamily
    range: integer
  tc_family_id:
    name: tc_family_id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    alias: tc_family_id
    owner: ProteinTCFamily
    domain_of:
    - ProteinTCFamily
    range: integer