Class: RegulonRegulator

Transcription factor/regulator in a regulon.

URI: https://w3id.org/kbase/phagefoundry_genome_browser/RegulonRegulator

classDiagram class RegulonRegulator click RegulonRegulator href "../RegulonRegulator/" RegulonRegulator : gene_id RegulonRegulator : id RegulonRegulator : regulon_id

Slots

Name	Cardinality and Range	Inheritance
id	1 Integer	direct
regulon_id	0..1 Integer	direct
gene_id	0..1 Integer	direct

Identifier and Mapping Information

Annotations

property	value
source_table	browser_regulon_regulators

Schema Source

from schema: https://w3id.org/kbase/phagefoundry_genome_browser

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/phagefoundry_genome_browser/RegulonRegulator
native	https://w3id.org/kbase/phagefoundry_genome_browser/RegulonRegulator

LinkML Source

Direct

name: RegulonRegulator
annotations:
  source_table:
    tag: source_table
    value: browser_regulon_regulators
description: Transcription factor/regulator in a regulon.
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    identifier: true
    domain_of:
    - Genome
    - Contig
    - Gene
    - Protein
    - Annotation
    - CAZyFamily
    - COGClass
    - ECNumber
    - EggNOGDescription
    - GOTerm
    - KEGGOrtholog
    - KEGGPathway
    - KEGGReaction
    - Operon
    - OrthologGroup
    - Regulon
    - RegulonRegulator
    - Sample
    - SampleMetadata
    - Site
    - GenomeTag
    range: integer
    required: true
  regulon_id:
    name: regulon_id
    comments:
    - Foreign key to Regulon.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    domain_of:
    - RegulonRegulator
    range: integer
  gene_id:
    name: gene_id
    comments:
    - Foreign key to Gene.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    domain_of:
    - RegulonRegulator
    range: integer

Induced

name: RegulonRegulator
annotations:
  source_table:
    tag: source_table
    value: browser_regulon_regulators
description: Transcription factor/regulator in a regulon.
from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    identifier: true
    alias: id
    owner: RegulonRegulator
    domain_of:
    - Genome
    - Contig
    - Gene
    - Protein
    - Annotation
    - CAZyFamily
    - COGClass
    - ECNumber
    - EggNOGDescription
    - GOTerm
    - KEGGOrtholog
    - KEGGPathway
    - KEGGReaction
    - Operon
    - OrthologGroup
    - Regulon
    - RegulonRegulator
    - Sample
    - SampleMetadata
    - Site
    - GenomeTag
    range: integer
    required: true
  regulon_id:
    name: regulon_id
    comments:
    - Foreign key to Regulon.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    alias: regulon_id
    owner: RegulonRegulator
    domain_of:
    - RegulonRegulator
    range: integer
  gene_id:
    name: gene_id
    comments:
    - Foreign key to Gene.id
    from_schema: https://w3id.org/kbase/phagefoundry_genome_browser
    rank: 1000
    alias: gene_id
    owner: RegulonRegulator
    domain_of:
    - RegulonRegulator
    range: integer