Class: GenomeSet

Collection of genomes for comparative analysis.

URI: https://w3id.org/kbase/phagefoundry_strain_modelling/GenomeSet

classDiagram class GenomeSet click GenomeSet href "../GenomeSet/" GenomeSet : description GenomeSet : id GenomeSet : name

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 Integer		direct
name	0..1 String	Genome set name	direct
description	0..1 String		direct

Identifier and Mapping Information

Annotations

property	value
source_table	strainmodelling_genome_set

Schema Source

from schema: https://w3id.org/kbase/phagefoundry_strain_modelling

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/phagefoundry_strain_modelling/GenomeSet
native	https://w3id.org/kbase/phagefoundry_strain_modelling/GenomeSet

LinkML Source

Direct

name: GenomeSet
annotations:
  source_table:
    tag: source_table
    value: strainmodelling_genome_set
description: Collection of genomes for comparative analysis.
from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    identifier: true
    domain_of:
    - Organism
    - OrganismMetadata
    - Genome
    - GenomeSet
    - Sequence
    - Gene
    - Experiment
    - ExperimentMetadata
    - ExperimentMetric
    - Feature
    - FeatureMetric
    - FeatureInterval
    - Interaction
    - Interval
    - ProteinFamily
    range: integer
    required: true
  name:
    name: name
    description: Genome set name
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    domain_of:
    - Organism
    - Genome
    - GenomeSet
    - Sequence
    - Experiment
    - Feature
    - ProteinFamily
    range: string
  description:
    name: description
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    domain_of:
    - Organism
    - GenomeSet
    - Experiment
    - ProteinFamily
    range: string

Induced

name: GenomeSet
annotations:
  source_table:
    tag: source_table
    value: strainmodelling_genome_set
description: Collection of genomes for comparative analysis.
from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    identifier: true
    alias: id
    owner: GenomeSet
    domain_of:
    - Organism
    - OrganismMetadata
    - Genome
    - GenomeSet
    - Sequence
    - Gene
    - Experiment
    - ExperimentMetadata
    - ExperimentMetric
    - Feature
    - FeatureMetric
    - FeatureInterval
    - Interaction
    - Interval
    - ProteinFamily
    range: integer
    required: true
  name:
    name: name
    description: Genome set name
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    alias: name
    owner: GenomeSet
    domain_of:
    - Organism
    - Genome
    - GenomeSet
    - Sequence
    - Experiment
    - Feature
    - ProteinFamily
    range: string
  description:
    name: description
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    alias: description
    owner: GenomeSet
    domain_of:
    - Organism
    - GenomeSet
    - Experiment
    - ProteinFamily
    range: string