Class: OrganismMetadata

Extended metadata for organisms as key-value pairs.

URI: https://w3id.org/kbase/phagefoundry_strain_modelling/OrganismMetadata

classDiagram class OrganismMetadata click OrganismMetadata href "../OrganismMetadata/" OrganismMetadata : id OrganismMetadata : key OrganismMetadata : organism_id OrganismMetadata : value

Slots

Name	Cardinality and Range	Inheritance
id	1 Integer	direct
organism_id	0..1 Integer	direct
key	0..1 String	direct
value	0..1 String	direct

Identifier and Mapping Information

Annotations

property	value
source_table	strainmodelling_organism_metadata

Schema Source

from schema: https://w3id.org/kbase/phagefoundry_strain_modelling

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/kbase/phagefoundry_strain_modelling/OrganismMetadata
native	https://w3id.org/kbase/phagefoundry_strain_modelling/OrganismMetadata

LinkML Source

Direct

name: OrganismMetadata
annotations:
  source_table:
    tag: source_table
    value: strainmodelling_organism_metadata
description: Extended metadata for organisms as key-value pairs.
from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    identifier: true
    domain_of:
    - Organism
    - OrganismMetadata
    - Genome
    - GenomeSet
    - Sequence
    - Gene
    - Experiment
    - ExperimentMetadata
    - ExperimentMetric
    - Feature
    - FeatureMetric
    - FeatureInterval
    - Interaction
    - Interval
    - ProteinFamily
    range: integer
    required: true
  organism_id:
    name: organism_id
    comments:
    - Foreign key to Organism.id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    domain_of:
    - OrganismMetadata
    - Genome
    range: integer
  key:
    name: key
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    domain_of:
    - OrganismMetadata
    - ExperimentMetadata
    range: string
  value:
    name: value
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    domain_of:
    - OrganismMetadata
    - ExperimentMetadata
    - ExperimentMetric
    - FeatureMetric
    range: string

Induced

name: OrganismMetadata
annotations:
  source_table:
    tag: source_table
    value: strainmodelling_organism_metadata
description: Extended metadata for organisms as key-value pairs.
from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
attributes:
  id:
    name: id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    identifier: true
    alias: id
    owner: OrganismMetadata
    domain_of:
    - Organism
    - OrganismMetadata
    - Genome
    - GenomeSet
    - Sequence
    - Gene
    - Experiment
    - ExperimentMetadata
    - ExperimentMetric
    - Feature
    - FeatureMetric
    - FeatureInterval
    - Interaction
    - Interval
    - ProteinFamily
    range: integer
    required: true
  organism_id:
    name: organism_id
    comments:
    - Foreign key to Organism.id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    alias: organism_id
    owner: OrganismMetadata
    domain_of:
    - OrganismMetadata
    - Genome
    range: integer
  key:
    name: key
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    alias: key
    owner: OrganismMetadata
    domain_of:
    - OrganismMetadata
    - ExperimentMetadata
    range: string
  value:
    name: value
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    alias: value
    owner: OrganismMetadata
    domain_of:
    - OrganismMetadata
    - ExperimentMetadata
    - ExperimentMetric
    - FeatureMetric
    range: string