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Class: ProteinFamilyGene

Genes belonging to protein families.

URI: https://w3id.org/kbase/phagefoundry_strain_modelling/ProteinFamilyGene

classDiagram class ProteinFamilyGene click ProteinFamilyGene href "../ProteinFamilyGene/" ProteinFamilyGene : gene_id ProteinFamilyGene : protein_family_id

Slots

Name Cardinality and Range Description Inheritance
protein_family_id 0..1
Integer		 direct
gene_id 0..1
Integer		 direct

Identifier and Mapping Information

Annotations

property value
source_table strainmodelling_protein_family_genes

Schema Source

  • from schema: https://w3id.org/kbase/phagefoundry_strain_modelling

Mappings

Mapping Type Mapped Value
self https://w3id.org/kbase/phagefoundry_strain_modelling/ProteinFamilyGene
native https://w3id.org/kbase/phagefoundry_strain_modelling/ProteinFamilyGene

LinkML Source

Direct

name: ProteinFamilyGene
annotations:
  source_table:
    tag: source_table
    value: strainmodelling_protein_family_genes
description: Genes belonging to protein families.
from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
attributes:
  protein_family_id:
    name: protein_family_id
    comments:
    - Foreign key to ProteinFamily.id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    domain_of:
    - ProteinFamilyGene
    - ProteinFamilyFeature
    range: integer
  gene_id:
    name: gene_id
    comments:
    - Foreign key to Gene.id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    domain_of:
    - ProteinFamilyGene
    range: integer

Induced

name: ProteinFamilyGene
annotations:
  source_table:
    tag: source_table
    value: strainmodelling_protein_family_genes
description: Genes belonging to protein families.
from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
attributes:
  protein_family_id:
    name: protein_family_id
    comments:
    - Foreign key to ProteinFamily.id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    alias: protein_family_id
    owner: ProteinFamilyGene
    domain_of:
    - ProteinFamilyGene
    - ProteinFamilyFeature
    range: integer
  gene_id:
    name: gene_id
    comments:
    - Foreign key to Gene.id
    from_schema: https://w3id.org/kbase/phagefoundry_strain_modelling
    rank: 1000
    alias: gene_id
    owner: ProteinFamilyGene
    domain_of:
    - ProteinFamilyGene
    range: integer