Class: Procedure

URI: comet:Procedure

classDiagram class Procedure click Procedure href "../Procedure" InvestigativeEntity <|-- Procedure click InvestigativeEntity href "../InvestigativeEntity" Procedure <|-- InvestigativeProtocol click InvestigativeProtocol href "../InvestigativeProtocol" Procedure <|-- StudyDesign click StudyDesign href "../StudyDesign" Procedure : classification Procedure --> "0..1" Concept : classification click Concept href "../Concept" Procedure : description Procedure : has_location Procedure --> "0..1" Location : has_location click Location href "../Location" Procedure : has_time Procedure --> "0..1" Duration : has_time click Duration href "../Duration" Procedure : id Procedure : metadata Procedure --> "0..1" CreationHistory : metadata click CreationHistory href "../CreationHistory" Procedure : name Procedure : ontology_types Procedure --> "*" Concept : ontology_types click Concept href "../Concept" Procedure : type

Inheritance

Thing
- InvestigativeEntity
  - Procedure
    - InvestigativeProtocol
    - StudyDesign

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 Uriorcurie	A unique identifier for a thing	Thing
name	0..1 String	A human-readable name for a thing	Thing
description	0..1 String	A human-readable description for a thing	Thing
type	0..1 String	A type for a thing	Thing
classification	0..1 Concept	A precise classification of the thing, using a concept from an ontology, cont...	Thing
ontology_types	* Concept	A collection of concepts that help to classify the thing, using concepts from...	Thing
has_location	0..1 Location		Thing
has_time	0..1 Duration		Thing
metadata	0..1 CreationHistory		Thing

Usages

used by	used in	type	used
Observation	procedure_used	range	Procedure

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/comet

Mappings

Mapping Type	Mapped Value
self	comet:Procedure
native	comet:Procedure
close	OBI:0000260, OBI:0000272, OBI:0000070

LinkML Source

Direct

name: Procedure
from_schema: https://w3id.org/comet
close_mappings:
- OBI:0000260
- OBI:0000272
- OBI:0000070
is_a: InvestigativeEntity
slot_usage:
  classification:
    name: classification
    bindings:
    - range: InvestigativeProtocolEnum
      obligation_level: RECOMMENDED
      binds_value_of: id

Induced

name: Procedure
from_schema: https://w3id.org/comet
close_mappings:
- OBI:0000260
- OBI:0000272
- OBI:0000070
is_a: InvestigativeEntity
slot_usage:
  classification:
    name: classification
    bindings:
    - range: InvestigativeProtocolEnum
      obligation_level: RECOMMENDED
      binds_value_of: id
attributes:
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://w3id.org/comet
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: Procedure
    domain_of:
    - Thing
    range: uriorcurie
    required: true
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://w3id.org/comet
    exact_mappings:
    - rdfs:label
    rank: 1000
    slot_uri: schema:name
    alias: name
    owner: Procedure
    domain_of:
    - Thing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://w3id.org/comet
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: Procedure
    domain_of:
    - Thing
    - TimePoint
    - CreationHistoryAction
    range: string
  type:
    name: type
    description: A type for a thing. The range of this should be a class within the
      schema. It is intended for schema-based classification. Anything beneath the
      shoreline of the schema should use `classification`.
    from_schema: https://w3id.org/comet
    rank: 1000
    designates_type: true
    alias: type
    owner: Procedure
    domain_of:
    - Thing
    range: string
  classification:
    name: classification
    description: A precise classification of the thing, using a concept from an ontology,
      controlled vocabulary, thesaurus, or taxonomy. Some schema classes may choose
      to restrict the range of values which this slot can take, using `values_from`,
      or bindings.
    from_schema: https://w3id.org/comet
    rank: 1000
    alias: classification
    owner: Procedure
    domain_of:
    - Thing
    range: Concept
    bindings:
    - range: InvestigativeProtocolEnum
      obligation_level: RECOMMENDED
      binds_value_of: id
  ontology_types:
    name: ontology_types
    description: A collection of concepts that help to classify the thing, using concepts
      from an ontolology,  thesaurus, or taxonomy.
    from_schema: https://w3id.org/comet
    rank: 1000
    alias: ontology_types
    owner: Procedure
    domain_of:
    - Thing
    range: Concept
    multivalued: true
  has_location:
    name: has_location
    from_schema: https://w3id.org/comet
    rank: 1000
    alias: has_location
    owner: Procedure
    domain_of:
    - Thing
    range: Location
  has_time:
    name: has_time
    from_schema: https://w3id.org/comet
    rank: 1000
    alias: has_time
    owner: Procedure
    domain_of:
    - Thing
    - Observation
    - Event
    - Investigation
    - Relationship
    range: Duration
  metadata:
    name: metadata
    from_schema: https://w3id.org/comet
    rank: 1000
    alias: metadata
    owner: Procedure
    domain_of:
    - Thing
    range: CreationHistory