Class: HydrocarbonResources-cores

hydrocarbon resources-cores

URI: mixs.vocab:HydrocarbonResources-cores

Children

• HydrocarbonResources-coresME - Combinatorial checklist Metagenome or Environmental with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIGSBacteria - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIGSEukaryote - Combinatorial checklist Minimal Information about a Genome Sequence: eukaryote with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIGSOrg - Combinatorial checklist Minimal Information about a Genome Sequence: org with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIGSPlant - Combinatorial checklist Minimal Information about a Genome Sequence: plant with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIGSVirus - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIMAG - Combinatorial checklist Minimum Information About a Metagenome-Assembled Genome with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIMARKSSpecimen - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIMARKSSurvey - Combinatorial checklist Minimal Information about a Marker Specimen: survey with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMISAG - Combinatorial checklist Minimum Information About a Single Amplified Genome with environmental package hydrocarbon resources-cores
• HydrocarbonResources-coresMIUVIG - Combinatorial checklist Minimum Information About an Uncultivated Virus Genome with environmental package hydrocarbon resources-cores

Referenced by class

Attributes

Own

• additional_info _OPT
  • Description: Information that doesn’t fit anywhere else. Can also be used to propose new entries for fields with controlled vocabulary
  • range: String
  • Example: None
• alkalinity _OPT
  • Description: Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate
  • range: QuantityValue
  • Example: 50 milligram per liter None
• alkalinity_method _OPT
  • Description: Method used for alkalinity measurement
  • range: String
  • Example: titration None
• alt _OPT
  • Description: Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth’s surface. In this context, the altitude measurement is the vertical distance between the earth’s surface above sea level and the sampled position in the air
  • range: QuantityValue
  • Example: 100 meter None
• ammonium _OPT
  • Description: Concentration of ammonium in the sample
  • range: QuantityValue
  • Example: 1.5 milligram per liter None
• api _OPT
  • Description: API gravity is a measure of how heavy or light a petroleum liquid is compared to water (source: https://en.wikipedia.org/wiki/API_gravity) (e.g. 31.1¬∞ API)
  • range: QuantityValue
  • Example: None
• aromatics_pc _OPT
  • Description: Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)
  • range: String
  • Example: None
• asphaltenes_pc _OPT
  • Description: Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)
  • range: String
  • Example: None
• basin _OPT
  • Description: Name of the basin (e.g. Campos)
  • range: String
  • Example: None
• benzene _OPT
  • Description: Concentration of benzene in the sample
  • range: QuantityValue
  • Example: None
• calcium _OPT
  • Description: Concentration of calcium in the sample
  • range: QuantityValue
  • Example: 0.2 micromole per liter None
• chloride _OPT
  • Description: Concentration of chloride in the sample
  • range: QuantityValue
  • Example: 5000 milligram per liter None
• collection_date _OPT
  • Description: The time of sampling, either as an instance (single point in time) or interval. In case no exact time is available, the date/time can be right truncated i.e. all of these are valid times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10; 2008-01-23; 2008-01; 2008; Except: 2008-01; 2008 all are ISO8601 compliant
  • range: Date
  • Example: 2018-05-11T10:00:00+01:00 None
• density _OPT
  • Description: Density of the sample, which is its mass per unit volume (aka volumetric mass density)
  • range: QuantityValue
  • Example: 1000 kilogram per cubic meter None
• depos_env _OPT
  • Description: Main depositional environment (https://en.wikipedia.org/wiki/Depositional_environment). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Continental - Alluvial None
• depth _OPT
  • Description: The vertical distance below local surface, e.g. For sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.
  • range: String
  • Example: None
• diss_carb_dioxide _OPT
  • Description: Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample
  • range: QuantityValue
  • Example: 5 milligram per liter None
• diss_inorg_carb _OPT
  • Description: Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter
  • range: QuantityValue
  • Example: 2059 micromole per kilogram None
• diss_inorg_phosp _OPT
  • Description: Concentration of dissolved inorganic phosphorus in the sample
  • range: QuantityValue
  • Example: 56.5 micromole per liter None
• diss_iron _OPT
  • Description: Concentration of dissolved iron in the sample
  • range: QuantityValue
  • Example: None
• diss_org_carb _OPT
  • Description: Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid
  • range: QuantityValue
  • Example: 197 micromole per liter None
• diss_oxygen_fluid _OPT
  • Description: Concentration of dissolved oxygen in the oil field produced fluids as it contributes to oxgen-corrosion and microbial activity (e.g. Mic).
  • range: QuantityValue
  • Example: None
• elev _OPT
  • Description: Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth’s surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit
  • range: QuantityValue
  • Example: 100 meter None
• env_broad_scale _OPT

  • Description: In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). We recommend using subclasses of ENVO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428. Format (one term): termLabel [termID], Format (multiple terms): termLabel [termID]

    termLabel [termID]

    termLabel [termID]. Example: Annotating a water sample from the photic zone in middle of the Atlantic Ocean, consider: oceanic epipelagic zone biome [ENVO:01000033]. Example: Annotating a sample from the Amazon rainforest consider: tropical moist broadleaf forest biome [ENVO:01000228]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html

  • range: String
  • Example: forest biome [ENVO:01000174] None
• env_local_scale _OPT

  • Description: In this field, report the entity or entities which are in your sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. Please use terms that are present in ENVO and which are of smaller spatial grain than your entry for env_broad_scale. Format (one term): termLabel [termID]; Format (multiple terms): termLabel [termID]

    termLabel [termID]

    termLabel [termID]. Example: Annotating a pooled sample taken from various vegetation layers in a forest consider: canopy [ENVO:00000047]

    herb and fern layer [ENVO:01000337]

    litter layer [ENVO:01000338]

    understory [01000335]

    shrub layer [ENVO:01000336]. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html

  • range: String
  • Example: litter layer [ENVO:01000338] None
• env_medium _OPT

  • Description: In this field, report which environmental material or materials (pipe separated) immediately surrounded your sample or specimen prior to sampling, using one or more subclasses of ENVO’s environmental material class: http://purl.obolibrary.org/obo/ENVO_00010483. Format (one term): termLabel [termID]; Format (multiple terms): termLabel [termID]

    termLabel [termID]

    termLabel [termID]. Example: Annotating a fish swimming in the upper 100 m of the Atlantic Ocean, consider: ocean water [ENVO:00002151]. Example: Annotating a duck on a pond consider: pond water [ENVO:00002228]

    air ENVO_00002005. If needed, request new terms on the ENVO tracker, identified here: http://www.obofoundry.org/ontology/envo.html

  • range: String
  • Example: soil [ENVO:00001998] None
• ethylbenzene _OPT
  • Description: Concentration of ethylbenzene in the sample
  • range: QuantityValue
  • Example: None
• field _OPT
  • Description: Name of the hydrocarbon field (e.g. Albacora)
  • range: String
  • Example: None
• geo_loc_name _OPT
  • Description: The geographical origin of the sample as defined by the country or sea name followed by specific region name. Country or sea names should be chosen from the INSDC country list (http://insdc.org/country.html), or the GAZ ontology (v 1.512) (http://purl.bioontology.org/ontology/GAZ)
  • range: String
  • Example: Germany;North Rhine-Westphalia;Eifel National Park None
• hc_produced _OPT
  • Description: Main hydrocarbon type produced from resource (i.e. Oil, gas, condensate, etc). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Gas None
• hcr _OPT
  • Description: Main Hydrocarbon Resource type. The term “Hydrocarbon Resource” HCR defined as a natural environmental feature containing large amounts of hydrocarbons at high concentrations potentially suitable for commercial exploitation. This term should not be confused with the Hydrocarbon Occurrence term which also includes hydrocarbon-rich environments with currently limited commercial interest such as seeps, outcrops, gas hydrates etc. If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Oil Sand None
• hcr_fw_salinity _OPT
  • Description: Original formation water salinity (prior to secondary recovery e.g. Waterflooding) expressed as TDS
  • range: QuantityValue
  • Example: None
• hcr_geol_age _OPT
  • Description: Geological age of hydrocarbon resource (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Silurian None
• hcr_pressure _OPT
  • Description: Original pressure of the hydrocarbon resource
  • range: String
  • Example: None
• hcr_temp _OPT
  • Description: Original temperature of the hydrocarbon resource
  • range: String
  • Example: 150-295 degree Celsius None
• lat_lon _OPT
  • Description: The geographical origin of the sample as defined by latitude and longitude. The values should be reported in decimal degrees and in WGS84 system
  • range: String
  • Example: 50.586825 6.408977 None
• lithology _OPT
  • Description: Hydrocarbon resource main lithology (Additional information: http://petrowiki.org/Lithology_and_rock_type_determination). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Volcanic None
• magnesium _OPT
  • Description: Concentration of magnesium in the sample
  • range: QuantityValue
  • Example: 52.8 micromole per kilogram None
• misc_param _OPT
  • Description: Any other measurement performed or parameter collected, that is not listed here
  • range: String
  • Example: Bicarbonate ion concentration;2075 micromole per kilogram None
• nitrate _OPT
  • Description: Concentration of nitrate in the sample
  • range: QuantityValue
  • Example: 65 micromole per liter None
• nitrite _OPT
  • Description: Concentration of nitrite in the sample
  • range: QuantityValue
  • Example: 0.5 micromole per liter None
• organism_count _OPT
  • Description: Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)
  • range:
  • Example: total prokaryotes;3.5e7 cells per milliliter;qPCR None
• organism_count_qpcr_info _OPT
  • Description: If qpcr was used for the cell count, the target gene name, the primer sequence and the cycling conditions should also be provided. (Example: 16S rrna; FWD:ACGTAGCTATGACGT REV:GTGCTAGTCGAGTAC; initial denaturation:90C_5min; denaturation:90C_2min; annealing:52C_30 sec; elongation:72C_30 sec; 90 C for 1 min; final elongation:72C_5min; 30 cycles)
  • range: String
  • Example: None
• owc_tvdss _OPT
  • Description: Depth of the original oil water contact (OWC) zone (average) (m TVDSS)
  • range: QuantityValue
  • Example: None
• oxy_stat_samp _OPT
  • Description: Oxygenation status of sample
  • range:
  • Example: aerobic None
• permeability _OPT
  • Description: Measure of the ability of a hydrocarbon resource to allow fluids to pass through it. (Additional information: https://en.wikipedia.org/wiki/Permeability_(earth_sciences))
  • range: String
  • Example: None
• ph _OPT
  • Description: Ph measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid
  • range: Double
  • Example: 7.2 None
• porosity _OPT
  • Description: Porosity of deposited sediment is volume of voids divided by the total volume of sample
  • range: String
  • Example: None
• potassium _OPT
  • Description: Concentration of potassium in the sample
  • range: QuantityValue
  • Example: 463 milligram per liter None
• pour_point _OPT
  • Description: Temperature at which a liquid becomes semi solid and loses its flow characteristics. In crude oil a high¬†pour point¬†is generally associated with a high paraffin content, typically found in crude deriving from a larger proportion of plant material. (soure: https://en.wikipedia.org/wiki/pour_point)
  • range: QuantityValue
  • Example: None
• pressure _OPT
  • Description: Pressure to which the sample is subject to, in atmospheres
  • range: QuantityValue
  • Example: 50 atmosphere None
• reservoir _OPT
  • Description: Name of the reservoir (e.g. Carapebus)
  • range: String
  • Example: None
• resins_pc _OPT
  • Description: Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)
  • range: String
  • Example: None
• samp_md _OPT
  • Description: In non deviated well, measured depth is equal to the true vertical depth, TVD (TVD=TVDSS plus the reference or datum it refers to). In deviated wells, the MD is the length of trajectory of the borehole measured from the same reference or datum. Common datums used are ground level (GL), drilling rig floor (DF), rotary table (RT), kelly bushing (KB) and mean sea level (MSL). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: 1534 meter;MSL None
• samp_salinity _OPT
  • Description: Salinity is the total concentration of all dissolved salts in a liquid or solid (in the form of an extract obtained by centrifugation) sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater
  • range: QuantityValue
  • Example: 1 milligram per liter None
• samp_store_dur _OPT
  • Description: Duration for which the sample was stored
  • range: String
  • Example: P1Y6M None
• samp_store_loc _OPT
  • Description: Location at which sample was stored, usually name of a specific freezer/room
  • range: String
  • Example: Freezer no:5 None
• samp_store_temp _OPT
  • Description: Temperature at which sample was stored, e.g. -80 degree Celsius
  • range: QuantityValue
  • Example: -80 degree Celsius None
• samp_subtype _OPT
  • Description: Name of sample sub-type. For example if “sample type” is “Produced Water” then subtype could be “Oil Phase” or “Water Phase”. If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: biofilm None
• samp_transport_cond _OPT
  • Description: Sample transport duration (in days or hrs) and temperature the sample was exposed to (e.g. 5.5 days; 20 ¬∞C)
  • range: String
  • Example: 5 days;-20 degree Celsius None
• samp_tvdss _OPT
  • Description: Depth of the sample i.e. The vertical distance between the sea level and the sampled position in the subsurface. Depth can be reported as an interval for subsurface samples e.g. 1325.75-1362.25 m
  • range: String
  • Example: None
• samp_type _OPT
  • Description: Type of material (i.e. sample) collected. Includes types like core, rock trimmings, drill cuttings, piping section, coupon, pigging debris, solid deposit, produced fluid, produced water, injected water, swabs, etc. If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: solid deposit None
• samp_vol_we_dna_ext _OPT
  • Description: Volume (ml), weight (g) of processed sample, or surface area swabbed from sample for DNA extraction
  • range: QuantityValue
  • Example: 1500 milliliter None
• samp_well_name _OPT
  • Description: Name of the well (e.g. BXA1123) where sample was taken
  • range: String
  • Example: None
• saturates_pc _OPT
  • Description: Saturate, Aromatic, Resin and Asphaltene¬†(SARA) is an analysis method that divides¬†crude oil¬†components according to their polarizability and polarity. There are three main methods to obtain SARA results. The most popular one is known as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)
  • range: String
  • Example: None
• sodium _OPT
  • Description: Sodium concentration in the sample
  • range: QuantityValue
  • Example: 10.5 milligram per liter None
• sr_dep_env _OPT
  • Description: Source rock depositional environment (https://en.wikipedia.org/wiki/Source_rock). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Marine None
• sr_geol_age _OPT
  • Description: Geological age of source rock (Additional info: https://en.wikipedia.org/wiki/Period_(geology)). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Silurian None
• sr_kerog_type _OPT
  • Description: Origin of kerogen. Type I: Algal (aquatic), Type II: planktonic and soft plant material (aquatic or terrestrial), Type III: terrestrial woody/ fibrous plant material (terrestrial), Type IV: oxidized recycled woody debris (terrestrial) (additional information: https://en.wikipedia.org/wiki/Kerogen). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Type IV None
• sr_lithology _OPT
  • Description: Lithology of source rock (https://en.wikipedia.org/wiki/Source_rock). If “other” is specified, please propose entry in “additional info” field
  • range:
  • Example: Coal None
• sulfate _OPT
  • Description: Concentration of sulfate in the sample
  • range: QuantityValue
  • Example: 5 micromole per liter None
• sulfate_fw _OPT
  • Description: Original sulfate concentration in the hydrocarbon resource
  • range: QuantityValue
  • Example: None
• sulfide _OPT
  • Description: Concentration of sulfide in the sample
  • range: QuantityValue
  • Example: 2 micromole per liter None
• suspend_solids _OPT
  • Description: Concentration of substances including a wide variety of material, such as silt, decaying plant and animal matter; can include multiple substances
  • range: String
  • Example: None
• tan _OPT
  • Description: Total Acid Number¬†(TAN) is a measurement of acidity that is determined by the amount of¬†potassium hydroxide¬†in milligrams that is needed to neutralize the acids in one gram of oil.¬†It is an important quality measurement of¬†crude oil. (source: https://en.wikipedia.org/wiki/Total_acid_number)
  • range: QuantityValue
  • Example: None
• temp _OPT
  • Description: Temperature of the sample at the time of sampling
  • range: QuantityValue
  • Example: 25 degree Celsius None
• toluene _OPT
  • Description: Concentration of toluene in the sample
  • range: QuantityValue
  • Example: None
• tot_iron _OPT
  • Description: Concentration of total iron in the sample
  • range: QuantityValue
  • Example: None
• tot_nitro _OPT
  • Description: Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen
  • range: QuantityValue
  • Example: 50 micromole per liter None
• tot_phosp _OPT
  • Description: Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus
  • range: QuantityValue
  • Example: 0.03 milligram per liter None
• tot_sulfur _OPT
  • Description: Concentration of total sulfur in the sample
  • range: QuantityValue
  • Example: None
• tvdss_of_hcr_pressure _OPT
  • Description: True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original pressure was measured (e.g. 1578 m).
  • range: QuantityValue
  • Example: None
• tvdss_of_hcr_temp _OPT
  • Description: True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original temperature was measured (e.g. 1345 m).
  • range: QuantityValue
  • Example: None
• vfa _OPT
  • Description: Concentration of Volatile Fatty Acids in the sample
  • range: QuantityValue
  • Example: None
• vfa_fw _OPT
  • Description: Original volatile fatty acid concentration in the hydrocarbon resource
  • range: QuantityValue
  • Example: None
• viscosity _OPT
  • Description: A measure of oil’s resistance¬†to gradual deformation by¬†shear stress¬†or¬†tensile stress (e.g. 3.5 cp; 100 ¬∞C)
  • range: String
  • Example: None
• win _OPT
  • Description: A unique identifier of a well or wellbore. This is part of the Global Framework for Well Identification initiative which is compiled by the Professional Petroleum Data Management Association (PPDM) in an effort to improve well identification systems. (Supporting information: https://ppdm.org/ and http://dl.ppdm.org/dl/690)
  • range: String
  • Example: None
• xylene _OPT
  • Description: Concentration of xylene in the sample
  • range: QuantityValue
  • Example: None