Genomics Standards Consortium

The Genomic Standards Consortium (GSC) is an open-membership working body formed in September 2005. The aim of the GSC is making genomic data discoverable. The GSC enables genomic data integration, discovery and comparison through international community-driven standards.

This project is maintained by cmungall

Slot: votu_class_appr

Cutoffs and approach used when clustering new UViGs in “species-level” vOTUs. Note that results from standard 95% ANI / 85% AF clustering should be provided alongside vOTUS defined from another set of thresholds, even if the latter are the ones primarily used during the analysis

URI: mixs.vocab:votu_class_appr

Domain and Range

None -> OPT String

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Other properties

     
Aliases:   vOTU classification approach
Comments:   Expected value: cutoffs and method used
    Position: 87.0
Examples:   Example(value=’95% ANI;85% AF; greedy incremental clustering’, description=None)