Class: Organoid

URI: hca:Organoid

Attributes

Own

• ➞describedBy _1..1
  • Description: The URL reference to the schema.
  • Range: String
• ➞schema_version _0..1
  • Description: The version number of the schema in major.minor.patch format.
  • Range: String
• ➞schema_type _1..1
  • Description: The type of the metadata schema entity.
  • Range: Organoid_schema_type_options
• ➞provenance _0..1
  • Description: Provenance information provided by the system.
  • Range: Provenance
• ➞biomaterial_core _1..1
  • Description: Core biomaterial-level information.
  • Range: BiomaterialCore
• ➞genus_species _0..*
  • Range: SpeciesOntology
• ➞model_organ _1..1
  • Description: Organ for which this organoid is a model system.
  • Range: OrganOntology
• ➞model_organ_part _0..1
  • Description: Organ part for which this organoid is a model system.
  • Range: OrganPartOntology
• ➞age _0..1
  • Description: Age of the organoid in Organoid age unit measured from when cell aggregates started differentiating to desired organoid model.
  • Range: Float
• ➞age_unit _0..1
  • Description: The unit in which Organoid age is expressed.
  • Range: TimeUnitOntology
• ➞size _0..1
  • Description: Size of the organoid in Organoid size unit.
  • Range: Float
• ➞size_unit _0..1
  • Description: The unit in which the Organoid size is expressed.
  • Range: LengthUnitOntology
• ➞morphology _0..1
  • Description: General description of the organoid morphology.
  • Range: String
• ➞embedded_in_matrigel _0..1
  • Description: Whether the organoid is embedded in a matrigel.
  • Range: Boolean
• ➞growth_environment _0..1
  • Description: Growth environment in which the organoid is grown.
  • Range: String
• ➞input_aggregate_cell_count _0..1
  • Description: Estimated number of cells per input cell aggregate.
  • Range: Float
• ➞stored_oxygen_levels _0..1
  • Description: Percent oxygen level organoid was stored in prior to sequencing.
  • Range: Float