Class: BiosampleDisease

Association between a C2M2 biosample and a disease positively (e.g. cancer tumor tissue sample) OR negatively (e.g. cancer-free tissue sample) identified for that biosample

URI: cfde_schema:BiosampleDisease

classDiagram class BiosampleDisease BiosampleDisease : association_type BiosampleDisease : biosample_id_namespace BiosampleDisease : biosample_local_id BiosampleDisease : disease

Slots

Name	Range	Cardinality	Description	Info
biosample_id_namespace	xsd:string	1..1	Identifier namespace for this biosample	.
biosample_local_id	xsd:string	1..1	The ID of this biosample	.
association_type	AssociationTypeEnum	1..1	The relationship between this biosample and this disease (e.g. 'observed' or '(tested for, but) not observed')	.
disease	Disease	1..1	A Disease Ontology CV term ID describing this disease	.

Usages

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/linkml/cfde

Mappings

Mapping Type	Mapped Value
self	['cfde_schema:BiosampleDisease']
native	['cfde_schema:BiosampleDisease']

LinkML Specification

Direct

name: biosample_disease
description: Association between a C2M2 biosample and a disease positively (e.g. cancer
  tumor tissue sample) OR negatively (e.g. cancer-free tissue sample) identified for
  that biosample
title: biosample_disease
from_schema: https://w3id.org/linkml/cfde
attributes:
  biosample_id_namespace:
    name: biosample_id_namespace
    description: Identifier namespace for this biosample
    from_schema: https://w3id.org/linkml/cfde
    range: string
    required: true
  biosample_local_id:
    name: biosample_local_id
    description: The ID of this biosample
    from_schema: https://w3id.org/linkml/cfde
    range: string
    required: true
  association_type:
    name: association_type
    description: The relationship between this biosample and this disease (e.g. 'observed'
      or '(tested for, but) not observed')
    from_schema: https://w3id.org/linkml/cfde
    range: AssociationTypeEnum
    required: true
  disease:
    name: disease
    description: A Disease Ontology CV term ID describing this disease
    from_schema: https://w3id.org/linkml/cfde
    range: disease
    required: true
unique_keys:
  biosample_disease_primary_key:
    unique_key_name: biosample_disease_primary_key
    unique_key_slots:
    - '[''biosample_id_namespace'', ''biosample_local_id'', ''association_type'',
      ''disease'']'

Induced

name: biosample_disease
description: Association between a C2M2 biosample and a disease positively (e.g. cancer
  tumor tissue sample) OR negatively (e.g. cancer-free tissue sample) identified for
  that biosample
title: biosample_disease
from_schema: https://w3id.org/linkml/cfde
attributes:
  biosample_id_namespace:
    name: biosample_id_namespace
    description: Identifier namespace for this biosample
    from_schema: https://w3id.org/linkml/cfde
    alias: biosample_id_namespace
    owner: biosample_disease
    range: string
    required: true
  biosample_local_id:
    name: biosample_local_id
    description: The ID of this biosample
    from_schema: https://w3id.org/linkml/cfde
    alias: biosample_local_id
    owner: biosample_disease
    range: string
    required: true
  association_type:
    name: association_type
    description: The relationship between this biosample and this disease (e.g. 'observed'
      or '(tested for, but) not observed')
    from_schema: https://w3id.org/linkml/cfde
    alias: association_type
    owner: biosample_disease
    range: AssociationTypeEnum
    required: true
  disease:
    name: disease
    description: A Disease Ontology CV term ID describing this disease
    from_schema: https://w3id.org/linkml/cfde
    alias: disease
    owner: biosample_disease
    range: disease
    required: true
unique_keys:
  biosample_disease_primary_key:
    unique_key_name: biosample_disease_primary_key
    unique_key_slots:
    - '[''biosample_id_namespace'', ''biosample_local_id'', ''association_type'',
      ''disease'']'