Class: RadiationTherapy

RadiationTherapy

erDiagram RadiationTherapy { integer dosage integer fractions } OntologyClass { string id string label } RadiationTherapy ||--|| OntologyClass : "bodySite" RadiationTherapy ||--|| OntologyClass : "modality"

Slots

Name	Cardinality and Range	Description	Inheritance
bodySite	1..1 OntologyClass	The anatomical site where radiation therapy was administered	direct
dosage	1..1 Integer	The total dose given in units of Gray (Gy)	direct
fractions	1..1 Integer	The total number of fractions delivered as part of treatment	direct
modality	1..1 OntologyClass	The modality of radiation therapy (e	direct

Usages

used by	used in	type	used
MedicalAction	radiationTherapy	range	RadiationTherapy

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/linkml/phenopackets/phenopackets

Mappings

Mapping Type	Mapped Value
self	phenopackets:RadiationTherapy
native	phenopackets:RadiationTherapy

LinkML Source

Direct

name: RadiationTherapy
description: RadiationTherapy
from_schema: https://w3id.org/linkml/phenopackets/phenopackets
attributes:
  bodySite:
    name: bodySite
    annotations:
      rank:
        tag: rank
        value: 2
    description: The anatomical site where radiation therapy was administered. REQUIRED.
      ARGO mapping radiation::anatomical_site_irradiated
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.anatomical_site_irradiated
    domain_of:
    - Procedure
    - RadiationTherapy
    range: OntologyClass
    required: true
    inlined: true
    inlined_as_list: true
  dosage:
    name: dosage
    annotations:
      rank:
        tag: rank
        value: 3
    description: The total dose given in units of Gray (Gy). REQUIRED. ARGO mapping
      radiation::radiation_therapy_dosage
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.radiation_therapy_dosage
    rank: 1000
    domain_of:
    - RadiationTherapy
    range: integer
    required: true
  fractions:
    name: fractions
    annotations:
      rank:
        tag: rank
        value: 4
    description: The total number of fractions delivered as part of treatment. REQUIRED.
      ARGO mapping radiation::radiation_therapy_fractions
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.radiation_therapy_fractions
    rank: 1000
    domain_of:
    - RadiationTherapy
    range: integer
    required: true
  modality:
    name: modality
    annotations:
      rank:
        tag: rank
        value: 1
    description: The modality of radiation therapy (e.g., electron, photon,…). REQUIRED.
      ARGO mapping radiation::radiation_therapy_modality
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.radiation_therapy_modality
    rank: 1000
    domain_of:
    - RadiationTherapy
    range: OntologyClass
    required: true
    inlined: true
    inlined_as_list: true

Induced

name: RadiationTherapy
description: RadiationTherapy
from_schema: https://w3id.org/linkml/phenopackets/phenopackets
attributes:
  bodySite:
    name: bodySite
    annotations:
      rank:
        tag: rank
        value: 2
    description: The anatomical site where radiation therapy was administered. REQUIRED.
      ARGO mapping radiation::anatomical_site_irradiated
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.anatomical_site_irradiated
    alias: bodySite
    owner: RadiationTherapy
    domain_of:
    - Procedure
    - RadiationTherapy
    range: OntologyClass
    required: true
    inlined: true
    inlined_as_list: true
  dosage:
    name: dosage
    annotations:
      rank:
        tag: rank
        value: 3
    description: The total dose given in units of Gray (Gy). REQUIRED. ARGO mapping
      radiation::radiation_therapy_dosage
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.radiation_therapy_dosage
    rank: 1000
    alias: dosage
    owner: RadiationTherapy
    domain_of:
    - RadiationTherapy
    range: integer
    required: true
  fractions:
    name: fractions
    annotations:
      rank:
        tag: rank
        value: 4
    description: The total number of fractions delivered as part of treatment. REQUIRED.
      ARGO mapping radiation::radiation_therapy_fractions
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.radiation_therapy_fractions
    rank: 1000
    alias: fractions
    owner: RadiationTherapy
    domain_of:
    - RadiationTherapy
    range: integer
    required: true
  modality:
    name: modality
    annotations:
      rank:
        tag: rank
        value: 1
    description: The modality of radiation therapy (e.g., electron, photon,…). REQUIRED.
      ARGO mapping radiation::radiation_therapy_modality
    from_schema: https://w3id.org/linkml/phenopackets/phenopackets
    exact_mappings:
    - ARGO:radiation.radiation_therapy_modality
    rank: 1000
    alias: modality
    owner: RadiationTherapy
    domain_of:
    - RadiationTherapy
    range: OntologyClass
    required: true
    inlined: true
    inlined_as_list: true