Slot: organism_count

Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)

URI: mixs.vocab:organism_count

Domain and Range

None -> _OPT String

Parents

• is_a: environment field

Children

Used by

• Air
• BuiltEnvironment
• Host-associated
• Human-associated
• Human-gut
• Human-oral
• Human-skin
• Human-vaginal
• HydrocarbonResources-cores
• HydrocarbonResources-fluidsSwabs
• MicrobialMatBiofilm
• MiscellaneousNaturalOrArtificialEnvironment
• Plant-associated
• Sediment
• WastewaterSludge
• Water

Other properties

Aliases:		organism count
Mappings:		MIXS:0000103
Comments:		Expected value: organism name;measurement value;enumeration
		Preferred unit: number of cells per cubic meter, number of cells per milliliter, number of cells per cubic centimeter
		Occurrence: m
		Position: 1
		This field is used in: 16 packages: air, built environment, host-associated, human-associated, human-gut, human-oral, human-skin, human-vaginal, hydrocarbon resources-cores, hydrocarbon resources-fluids_swabs, microbial mat_biofilm, miscellaneous natural or artificial environment, plant-associated, sediment, wastewater_sludge, water
Examples:		Example(value='total prokaryotes;3.5e7 cells per milliliter;qPCR', description=None)