Class: MIGS bacteria

Minimal Information about a Genome Sequence: cultured bacteria/archaea

URI: mixs.vocab:MIGSBacteria

Checklist for

• AirMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package air
• BuiltEnvironmentMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package built environment
• Host-associatedMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package host-associated
• Human-associatedMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package human-associated
• Human-gutMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package human-gut
• Human-oralMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package human-oral
• Human-skinMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package human-skin
• Human-vaginalMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package human-vaginal
• HydrocarbonResources-coresMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package hydrocarbon resources-cores
• HydrocarbonResources-fluidsSwabsMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package hydrocarbon resources-fluids_swabs
• MicrobialMatBiofilmMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package microbial mat_biofilm
• MiscellaneousNaturalOrArtificialEnvironmentMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package miscellaneous natural or artificial environment
• Plant-associatedMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package plant-associated
• SedimentMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package sediment
• SoilMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package soil
• WastewaterSludgeMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package wastewater_sludge
• WaterMIGSBacteria (mixin) - Combinatorial checklist Minimal Information about a Genome Sequence: cultured bacteria/archaea with environmental package water

Referenced by Package

Attributes

Own

• MIGS bacteria➞submitted_to_insdc _1..1
  • Range: String
• MIGS bacteria➞investigation_type _1..1
  • Range: investigation_type_enum
• MIGS bacteria➞samp_name _1..1
  • Range: String
• MIGS bacteria➞samp_taxon_id _1..1
  • Range: String
• MIGS bacteria➞project_name _1..1
  • Range: String
• MIGS bacteria➞experimental_factor _0..1
  • Range: String
• MIGS bacteria➞lat_lon _1..1
  • Range: String
• MIGS bacteria➞geo_loc_name _1..1
  • Range: String
• MIGS bacteria➞collection_date _1..1
  • Range: Date
• MIGS bacteria➞env_broad_scale _1..1
  • Range: String
• MIGS bacteria➞env_local_scale _1..1
  • Range: String
• MIGS bacteria➞env_medium _1..1
  • Range: String
• MIGS bacteria➞env_package _0..1
  • Range: env_package_enum
• MIGS bacteria➞subspecf_gen_lin _0..1
  • Range: String
• MIGS bacteria➞num_replicons _1..1
  • Range: Integer
• MIGS bacteria➞extrachrom_elements _0..1
  • Range: Integer
• MIGS bacteria➞estimated_size _0..1
  • Range: String
• MIGS bacteria➞ref_biomaterial _1..1
  • Range: String
• MIGS bacteria➞source_mat_id _0..1
  • Range: String
• MIGS bacteria➞pathogenicity _0..1
  • Range: String
• MIGS bacteria➞biotic_relationship _0..1
  • Range: biotic_relationship_enum
• MIGS bacteria➞specific_host _0..1
  • Range: String
• MIGS bacteria➞host_spec_range _0..1
  • Range: Integer
• MIGS bacteria➞health_disease_stat _0..1
  • Range: health_disease_stat_enum
• MIGS bacteria➞host_disease_stat _0..1
  • Range: String
• MIGS bacteria➞trophic_level _0..1
  • Range: trophic_level_enum
• MIGS bacteria➞encoded_traits _0..1
  • Range: String
• MIGS bacteria➞rel_to_oxygen _0..1
  • Range: rel_to_oxygen_enum
• MIGS bacteria➞isol_growth_condt _1..1
  • Range: String
• MIGS bacteria➞samp_collec_device _0..1
  • Range: String
• MIGS bacteria➞samp_collec_method _0..1
  • Range: String
• MIGS bacteria➞samp_mat_process _0..1
  • Range: String
• MIGS bacteria➞samp_size _0..1
  • Range: QuantityValue
• MIGS bacteria➞samp_vol_we_dna_ext _0..1
  • Range: QuantityValue
• MIGS bacteria➞nucl_acid_ext _0..1
  • Range: String
• MIGS bacteria➞nucl_acid_amp _0..1
  • Range: String
• MIGS bacteria➞lib_size _0..1
  • Range: Integer
• MIGS bacteria➞lib_reads_seqd _0..1
  • Range: Integer
• MIGS bacteria➞lib_layout _0..1
  • Range: lib_layout_enum
• MIGS bacteria➞lib_vector _0..1
  • Range: String
• MIGS bacteria➞lib_screen _0..1
  • Range: String
• MIGS bacteria➞adapters _0..1
  • Range: String
• MIGS bacteria➞seq_meth _1..1
  • Range: String
• MIGS bacteria➞tax_ident _0..1
  • Range: tax_ident_enum
• MIGS bacteria➞assembly_qual _1..1
  • Range: assembly_qual_enum
• MIGS bacteria➞assembly_name _0..1
  • Range: String
• MIGS bacteria➞assembly_software _1..1
  • Range: String
• MIGS bacteria➞annot _0..1
  • Range: String
• MIGS bacteria➞number_contig _1..1
  • Range: Integer
• MIGS bacteria➞feat_pred _0..1
  • Range: String
• MIGS bacteria➞ref_db _0..1
  • Range: String
• MIGS bacteria➞sim_search_meth _0..1
  • Range: String
• MIGS bacteria➞tax_class _0..1
  • Range: String
• MIGS bacteria➞compl_score _0..1
  • Range: compl_score_enum
• MIGS bacteria➞compl_software _0..1
  • Range: String
• MIGS bacteria➞associated resource _0..1
  • Range: String
• MIGS bacteria➞sop _0..1
  • Range: String

Other properties

Aliases:		MIGS.ba