Class: MIMARKS specimen

Minimal Information about a Marker Specimen: specimen

URI: mixs.vocab:MIMARKSSpecimen

Checklist for

• AirMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package air
• BuiltEnvironmentMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package built environment
• Host-associatedMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package host-associated
• Human-associatedMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package human-associated
• Human-gutMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package human-gut
• Human-oralMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package human-oral
• Human-skinMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package human-skin
• Human-vaginalMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package human-vaginal
• HydrocarbonResources-coresMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package hydrocarbon resources-cores
• HydrocarbonResources-fluidsSwabsMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package hydrocarbon resources-fluids_swabs
• MicrobialMatBiofilmMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package microbial mat_biofilm
• MiscellaneousNaturalOrArtificialEnvironmentMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package miscellaneous natural or artificial environment
• Plant-associatedMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package plant-associated
• SedimentMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package sediment
• SoilMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package soil
• WastewaterSludgeMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package wastewater_sludge
• WaterMIMARKSSpecimen (mixin) - Combinatorial checklist Minimal Information about a Marker Specimen: specimen with environmental package water

Referenced by Package

Attributes

Own

• MIMARKS specimen➞submitted_to_insdc _1..1
  • Range: String
• MIMARKS specimen➞investigation_type _1..1
  • Range: investigation_type_enum
• MIMARKS specimen➞samp_name _1..1
  • Range: String
• MIMARKS specimen➞samp_taxon_id _1..1
  • Range: String
• MIMARKS specimen➞project_name _1..1
  • Range: String
• MIMARKS specimen➞experimental_factor _0..1
  • Range: String
• MIMARKS specimen➞lat_lon _1..1
  • Range: String
• MIMARKS specimen➞geo_loc_name _1..1
  • Range: String
• MIMARKS specimen➞collection_date _1..1
  • Range: Date
• MIMARKS specimen➞env_broad_scale _1..1
  • Range: String
• MIMARKS specimen➞env_local_scale _1..1
  • Range: String
• MIMARKS specimen➞env_medium _1..1
  • Range: String
• MIMARKS specimen➞env_package _0..1
  • Range: env_package_enum
• MIMARKS specimen➞source_mat_id _0..1
  • Range: String
• MIMARKS specimen➞rel_to_oxygen _0..1
  • Range: rel_to_oxygen_enum
• MIMARKS specimen➞samp_collec_device _0..1
  • Range: String
• MIMARKS specimen➞samp_collec_method _0..1
  • Range: String
• MIMARKS specimen➞samp_mat_process _0..1
  • Range: String
• MIMARKS specimen➞size_frac _0..1
  • Range: String
• MIMARKS specimen➞samp_size _0..1
  • Range: QuantityValue
• MIMARKS specimen➞samp_vol_we_dna_ext _0..1
  • Range: QuantityValue
• MIMARKS specimen➞nucl_acid_ext _0..1
  • Range: String
• MIMARKS specimen➞nucl_acid_amp _0..1
  • Range: String
• MIMARKS specimen➞lib_size _0..1
  • Range: Integer
• MIMARKS specimen➞lib_reads_seqd _0..1
  • Range: Integer
• MIMARKS specimen➞lib_layout _0..1
  • Range: lib_layout_enum
• MIMARKS specimen➞lib_vector _0..1
  • Range: String
• MIMARKS specimen➞lib_screen _0..1
  • Range: String
• MIMARKS specimen➞target_gene _1..1
  • Range: String
• MIMARKS specimen➞target_subfragment _0..1
  • Range: String
• MIMARKS specimen➞pcr_primers _0..1
  • Range: String
• MIMARKS specimen➞mid _0..1
  • Range: String
• MIMARKS specimen➞adapters _0..1
  • Range: String
• MIMARKS specimen➞pcr_cond _0..1
  • Range: String
• MIMARKS specimen➞seq_meth _1..1
  • Range: String
• MIMARKS specimen➞seq_quality_check _0..1
  • Range: String
• MIMARKS specimen➞chimera_check _0..1
  • Range: String
• MIMARKS specimen➞assembly_software _0..1
  • Range: String
• MIMARKS specimen➞associated resource _0..1
  • Range: String
• MIMARKS specimen➞sop _0..1
  • Range: String

Other properties

Aliases:		MIMARKS.specimen
See also:		https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3367316